RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 MTMR2Q13614 643 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 ZNF658Q5TYW1 1059 aaPredicted RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 P2RX5Q93086 422 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 LSM14BQ9BX40 385 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 ADARB2Q9NS39 739 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 SSX2IPQ9Y2D8 614 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 PLCG1P19174 1290 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 ERCC3P19447 782 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 RASA1P20936 1047 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 PRELPP51888 382 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 MFSD14CQ5VZR4 134 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 PARK7Q99497 189 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 CPVLQ9H3G5 476 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 DISC1Q9NRI5 854 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 ANAPC4Q9UJX5 808 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 AGTPBP1Q9UPW5 1226 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 POLR2BP30876 1174 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 CALCOCO2Q13137 446 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 TAF1CQ15572 869 aaPredicted RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 PODXL2Q9NZ53 605 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 MTRF1LQ9UGC7 380 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 CDC27P30260 824 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 RBM10P98175 930 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 BHMT2Q9H2M3 363 aa12.32□□□□□ -0.44
POLR1B-202ENST00000333990 IKBKBO14920 756 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 MCM6Q14566 821 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 SLFN12LQ6IEE8 588 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 SAMD7Q7Z3H4 446 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 CCDC26Q8TAB7 109 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
POLR1B-202ENST00000333990 NT5C1BQ96P26 610 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 PPP2R3BQ9Y5P8 575 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 K7ERI5 159 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 TNPO2O14787 897 aaKnown RBP12.31□□□□□ -0.44
POLR1B-202ENST00000333990 EXOC3L4Q17RC7 722 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 MAATS1Q7Z4T9 603 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 FAM186BQ8IYM0 893 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 HAUS2Q9NVX0 235 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 IL1R1P14778 569 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 CCNE1P24864 410 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 STOX1Q6ZVD7 989 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 PPM1KQ8N3J5 372 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 MMS19Q96T76 1030 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 FANCLQ9NW38 375 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
POLR1B-202ENST00000333990 MEIS1O00470 390 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 SLC25A27O95847 323 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 VAV2P52735 878 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CASP7P55210 303 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CEP128Q6ZU80 1094 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 NLRP7Q8WX94 980 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 MRFAP1L1Q96HT8 127 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 STIM2Q9P246 746 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 LRFN2Q9ULH4 789 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 KNDC1Q76NI1 1749 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 FMN2Q9NZ56 1722 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CCDC66A2RUB6 948 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 DAPK3O43293 454 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 P4HBP07237 508 aaKnown RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CETPP11597 493 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 IGDCC4Q8TDY8 1250 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 NAPGQ99747 312 aaPredicted RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 ARFGAP3Q9NP61 516 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 ZNF157P51786 506 aaPredicted RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CXCL9Q07325 125 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 LRMPQ12912 555 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 SEMA3FQ13275 785 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CNOT6LQ96LI5 555 aaKnown RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 TUBGCP2Q9BSJ2 902 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 BCCIPQ9P287 314 aaKnown RBP eCLIP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 SALL1Q9NSC2 1324 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 HSF2BPO75031 334 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 GAS8O95995 478 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 CDC25AP30304 524 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 LACTBP83111 547 aaPredicted RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 LRRC63Q05C16 580 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 PPP1R7Q15435 360 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 MAN2A1Q16706 1144 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 PPP1R2P3Q6NXS1 205 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 KIAA1524Q8TCG1 905 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 MAIP1Q8WWC4 291 aa12.3□□□□□ -0.44
POLR1B-202ENST00000333990 SREK1Q8WXA9 508 aaKnown RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 RIOK1Q9BRS2 568 aaKnown RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 EPB41L4AQ9HCS5 686 aaPredicted RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 BZW2Q9Y6E2 419 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms