RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 KITP10721 976 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 POLR2BP30876 1174 aaKnown RBP11.46□□□□□ -0.57
CLN8-201ENST00000331222 CDKL2Q92772 493 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 CNOT6LQ96LI5 555 aaKnown RBP11.46□□□□□ -0.57
CLN8-201ENST00000331222 PIDD1Q9HB75 910 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 PTPRKQ15262 1439 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 RNF219Q5W0B1 726 aaPredicted RBP11.46□□□□□ -0.57
CLN8-201ENST00000331222 OR6B2Q6IFH4 312 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 SPOPLQ6IQ16 392 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 POLD4Q9HCU8 107 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 CYP2D7A0A087X1C5 515 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 SART1O43290 800 aaKnown RBP11.46□□□□□ -0.58
CLN8-201ENST00000331222 SRGAP2BP0DMP2 458 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 SLC7A5Q01650 507 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 FRA10AC1Q70Z53 315 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 FANCLQ9NW38 375 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 PNMA2Q9UL42 364 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 A0A1B0GUA9 196 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 HADHAP40939 763 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 CRKLP46109 303 aaKnown RBP11.46□□□□□ -0.58
CLN8-201ENST00000331222 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 IWS1Q96ST2 819 aa11.46□□□□□ -0.58
CLN8-201ENST00000331222 PUS3Q9BZE2 481 aaKnown RBP11.46□□□□□ -0.58
CLN8-201ENST00000331222 PIK3R2O00459 728 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 KRT1P04264 644 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 SCG2P13521 617 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 ARHGEF18Q6ZSZ5 1173 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 SCYL3Q8IZE3 742 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 ZMYM3Q14202 1370 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 FGAP02671 866 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 SEPT8Q92599 483 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 TRIM67Q6ZTA4 783 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 SNX19Q92543 992 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 CCDC138Q96M89 665 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 GOLGA8MH3BSY2 632 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 EVI5O60447 810 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 RXRBP28702 533 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 FAM133BQ5BKY9 247 aaKnown RBP11.45□□□□□ -0.58
CLN8-201ENST00000331222 C10orf76Q5T2E6 689 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 BBS5Q8N3I7 341 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 HIPK4Q8NE63 616 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 SLC8A2Q9UPR5 921 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 ZMYM6O95789 1325 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 NOSTRINQ8IVI9 506 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 DYNLL2Q96FJ2 89 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 ZNF341Q9BYN7 854 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 MCF2LO15068 1137 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 CCDC84Q86UT8 332 aaPredicted RBP11.45□□□□□ -0.58
CLN8-201ENST00000331222 SIX6OS1Q8N1H7 587 aa11.45□□□□□ -0.58
CLN8-201ENST00000331222 SGSM2O43147 1006 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 CLCN1P35523 988 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 TMCO5AQ8N6Q1 288 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 FAM133AQ8N9E0 248 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 SLC7A3Q8WY07 619 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 MAML1Q92585 1016 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 TYW1Q9NV66 732 aaKnown RBP11.44□□□□□ -0.58
CLN8-201ENST00000331222 COL4A3BPQ9Y5P4 624 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 MOCS3O95396 460 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 PDXDC2PQ6P474 469 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 KDELC2Q7Z4H8 507 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 RNF135Q8IUD6 432 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 FANCBQ8NB91 859 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 OR6B3Q8NGW1 331 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 PPP1R36Q96LQ0 422 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 ATP8A1Q9Y2Q0 1164 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 MYO1FO00160 1098 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 USP17L8P0C7I0 530 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 NR2F2P24468 414 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 ART3Q13508 389 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 SLMAPQ14BN4 828 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 SGO2Q562F6 1265 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 ZBTB38Q8NAP3 1195 aaPredicted RBP11.44□□□□□ -0.58
CLN8-201ENST00000331222 ZNF507Q8TCN5 953 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 STAG1Q8WVM7 1258 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 C21orf2O43822 256 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 EIF2AK2P19525 551 aaKnown RBP11.44□□□□□ -0.58
CLN8-201ENST00000331222 OR8K1Q8NGG5 319 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 MFAP3P55082 362 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 SMC5Q8IY18 1101 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 IMPACTQ9P2X3 320 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 DUOX2Q9NRD8 1548 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 LIG3P49916 1009 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 CCNA1P78396 465 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 CTTNQ14247 550 aaKnown RBP11.44□□□□□ -0.58
CLN8-201ENST00000331222 KRT26Q7Z3Y9 468 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 CERS3Q8IU89 383 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 TRIM58Q8NG06 486 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 CNKSR1Q969H4 720 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 GCNT4Q9P109 453 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 TSKSQ9UJT2 592 aa11.44□□□□□ -0.58
CLN8-201ENST00000331222 EIF2AK4Q9P2K8 1649 aaKnown RBP11.43□□□□□ -0.58
CLN8-201ENST00000331222 USP17L3A6NCW0 530 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 USP17L4A6NCW7 530 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 N4BP1O75113 896 aaKnown RBP11.43□□□□□ -0.58
CLN8-201ENST00000331222 TTLL1O95922 423 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 STX1BP61266 288 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 HDLBPQ00341 1268 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms