RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CNNM4Q6P4Q7 775 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 NELFCDQ8IXH7 590 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 PCMTD1Q96MG8 357 aaPredicted RBP13.84□□□□□ -0.19
RNF4-201ENST00000314289 STK17AQ9UEE5 414 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 TTC26A0AVF1 554 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 GNG11P61952 73 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 ETF1P62495 437 aaKnown RBP13.84□□□□□ -0.19
RNF4-201ENST00000314289 PABPC4Q13310 644 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■■□□ 16.1
RNF4-201ENST00000314289 ORC2Q13416 577 aaPredicted RBP13.84□□□□□ -0.19
RNF4-201ENST00000314289 TMEM119Q4V9L6 283 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 CHP1Q99653 195 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 ZNF341Q9BYN7 854 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 MAGEF1Q9HAY2 307 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 KCNMB3Q9NPA1 279 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 KCND1Q9NSA2 647 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 GCFC2P16383 781 aaKnown RBP13.83□□□□□ -0.2
RNF4-201ENST00000314289 CAP2P40123 477 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 ERVK-24P63145 666 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 ARHGAP29Q52LW3 1261 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 UNC13DQ70J99 1090 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 MB21D1Q8N884 522 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 LENG9Q96B70 501 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 DHTKD1Q96HY7 919 aaPredicted RBP13.83□□□□□ -0.2
RNF4-201ENST00000314289 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 TFR2Q9UP52 801 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 RGPD3A6NKT7 1758 aaPredicted RBP13.83□□□□□ -0.2
RNF4-201ENST00000314289 RGPD4Q7Z3J3 1758 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 NFKBIEO00221 500 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 URI1O94763 535 aaPredicted RBP13.83□□□□□ -0.2
RNF4-201ENST00000314289 USP11P51784 963 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 CATSPER3Q86XQ3 398 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 CPXCR1Q8N123 301 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 HOMER2Q9NSB8 354 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 ABHD10Q9NUJ1 306 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 AGPAT5Q9NUQ2 364 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 RGL1Q9NZL6 768 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 PKD2L1Q9P0L9 805 aa13.83□□□□□ -0.2
RNF4-201ENST00000314289 MSH4O15457 936 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 ZSCAN12O43309 604 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 PLA2G4BP0C869 781 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 R3HDM1Q15032 1099 aaKnown RBP13.82□□□□□ -0.2
RNF4-201ENST00000314289 GPBP1Q86WP2 473 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 ETNPPLQ8TBG4 499 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 AGBL1Q96MI9 1066 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 PANX2Q96RD6 677 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 NOC4LQ9BVI4 516 aaKnown RBP13.82□□□□□ -0.2
RNF4-201ENST00000314289 KIF2AO00139 706 aaPredicted RBP13.82□□□□□ -0.2
RNF4-201ENST00000314289 KRT18P05783 430 aaKnown RBP13.82□□□□□ -0.2
RNF4-201ENST00000314289 INPP5BP32019 993 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 KCNJ6P48051 423 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 CLCN6P51797 869 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 TBC1D8BQ0IIM8 1120 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 COASYQ13057 564 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 CCDC155Q8N6L0 562 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 CRYGNQ8WXF5 182 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 DNAJC19Q96DA6 116 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 THAP9Q9H5L6 903 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 PANK4Q9NVE7 773 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 LGALS16A8MUM7 142 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 ZBTB39O15060 712 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 TPM1P09493 284 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 AP3B2Q13367 1082 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 TRMT1LQ7Z2T5 733 aaKnown RBP13.82□□□□□ -0.2
RNF4-201ENST00000314289 AGBL3Q8NEM8 1001 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 VCPKMTQ9H867 229 aa13.82□□□□□ -0.2
RNF4-201ENST00000314289 EML1O00423 815 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 EEF1GP26641 437 aaKnown RBP13.81□□□□□ -0.2
RNF4-201ENST00000314289 SPIRE1Q08AE8 756 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
RNF4-201ENST00000314289 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
RNF4-201ENST00000314289 HERC4Q5GLZ8 1057 aaPredicted RBP13.81□□□□□ -0.2
RNF4-201ENST00000314289 BTNL9Q6UXG8 535 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 CNGA4Q8IV77 575 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 SLF1Q9BQI6 1058 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.81□□□□□ -0.2
RNF4-201ENST00000314289 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
RNF4-201ENST00000314289 SREBF1P36956 1147 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 ZNF507Q8TCN5 953 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 PIGOQ8TEQ8 1089 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 ADGRG1Q9Y653 693 aa13.81□□□□□ -0.2
RNF4-201ENST00000314289 CCDC175P0C221 793 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 CTTNQ14247 550 aaKnown RBP13.8□□□□□ -0.2
RNF4-201ENST00000314289 WDR18Q9BV38 432 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 GLT8D2Q9H1C3 349 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 TMEM51Q9NW97 253 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 SFI1A8K8P3 1242 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 VGLL3A8MV65 326 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 POLR3GO15318 223 aaPredicted RBP13.8□□□□□ -0.2
RNF4-201ENST00000314289 PRELPP51888 382 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 ARSHQ5FYA8 562 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 MIIPQ5JXC2 388 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 CENPPQ6IPU0 288 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 MICALL2Q8IY33 904 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 FAM53CQ9NYF3 392 aa13.8□□□□□ -0.2
RNF4-201ENST00000314289 CYP3A7-CYP3A51PA0A087WV96 503 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 PVALEFA0A1B0GWK0 134 aa13.79□□□□□ -0.2
RNF4-201ENST00000314289 DDX39AO00148 427 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms