RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SALL1Q9NSC2 1324 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 DCAF8L1A6NGE4 600 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 SLURP2P0DP57 97 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 CD44P16070 742 aaKnown RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 PRPHP41219 470 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 GADL1Q6ZQY3 521 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 FAM133AQ8N9E0 248 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 IQCDQ96DY2 449 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 EPC1Q9H2F5 836 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 ABHD10Q9NUJ1 306 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 PSMC2P35998 433 aaKnown RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 RBM43Q6ZSC3 357 aaKnown RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 PPM1KQ8N3J5 372 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 SHPRHQ149N8 1683 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 PHLPP2Q6ZVD8 1323 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 OPA1O60313 960 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 TNNI1P19237 187 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 FBXL16Q8N461 479 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 PARD6BQ9BYG5 372 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 RABEP2Q9H5N1 569 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 IL17RBQ9NRM6 502 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 GOLGA8IPA6NC78 632 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 GOLGA8JA6NMD2 632 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 PEX26Q7Z412 305 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 ZNF341Q9BYN7 854 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 RSPH14Q9UHP6 348 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 POTEFA5A3E0 1075 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 POTEIP0CG38 1075 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 OAS2P29728 719 aaKnown RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 STK4Q13043 487 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 SMC1AQ14683 1233 aaKnown RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 CFAP221Q4G0U5 840 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 POTEGQ6S5H5 508 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 POTEEQ6S8J3 1075 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 PLVAPQ9BX97 442 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 MLXIPQ9HAP2 919 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 AFPP02771 609 aaKnown RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 FXR1P51114 621 aaKnown RBP eCLIP6.8□□□□□ -1.325e-7■■■■□ 19.5
PRKDC-201ENST00000314191 GLG1Q92896 1179 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 BCRP11274 1271 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 EAPPQ56P03 285 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 DALRD3Q5D0E6 543 aaKnown RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 STRIP1Q5VSL9 837 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 DCAF4Q8WV16 495 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 ZEB2O60315 1214 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 RNF187Q5TA31 235 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-201ENST00000314191 FAM160B2Q86V87 743 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 MOCS3O95396 460 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 GBP6Q6ZN66 633 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 TRIM9Q9C026 710 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 AZI2Q9H6S1 392 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 ZMYND10O75800 440 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 COASYQ13057 564 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 PPP1R18Q6NYC8 613 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 KRT26Q7Z3Y9 468 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 DAAM2Q86T65 1068 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 SUGCTQ9HAC7 445 aa6.8□□□□□ -1.32
PRKDC-201ENST00000314191 NPHP3-ACAD11A0A0J9YXS1 232 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 RHOBTB3O94955 611 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 DESP17661 470 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 USP14P54578 494 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 BANK1Q8NDB2 785 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 RGL1Q9NZL6 768 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 PSMD2Q13200 908 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 PANX2Q96RD6 677 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 SYNCQ9H7C4 482 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 CALCOCO1Q9P1Z2 691 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 ADAMTS1Q9UHI8 967 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 ASNSP08243 561 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 DLATP10515 647 aaKnown RBP6.79□□□□□ -1.32
PRKDC-201ENST00000314191 TCP1P17987 556 aaKnown RBP6.79□□□□□ -1.32
PRKDC-201ENST00000314191 UBLCP1Q8WVY7 318 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-201ENST00000314191 CEP170P1Q96L14 293 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 LIG4P49917 911 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 FAM20AQ96MK3 541 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 ADD3Q9UEY8 706 aaKnown RBP6.79□□□□□ -1.32
PRKDC-201ENST00000314191 SUGT1Q9Y2Z0 365 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 SPP2Q13103 211 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 TC2NQ8N9U0 490 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 RETREG2Q8NC44 543 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 KCNQ5Q9NR82 932 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 ZNF70Q9UC06 446 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-201ENST00000314191 MTUS1Q9ULD2 1270 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 LRRC53A6NM62 1247 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 CD19P15391 556 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 KIFAP3Q92845 792 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 PRMT6Q96LA8 375 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-201ENST00000314191 ZMYND12Q9H0C1 365 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 DPH5Q9H2P9 285 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 LRRC4BQ9NT99 713 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 USTQ9Y2C2 406 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 SIGLEC1Q9BZZ2 1709 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 DDR1Q08345 913 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 RASA3Q14644 834 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 CCDC25Q86WR0 208 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 LIMA1Q9UHB6 759 aaKnown RBP6.79□□□□□ -1.32
PRKDC-201ENST00000314191 GAP43P17677 238 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 EHHADHQ08426 723 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 FBXO38Q6PIJ6 1188 aa6.79□□□□□ -1.32
PRKDC-201ENST00000314191 LDHDQ86WU2 507 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms