RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 LRRC4BQ9NT99 713 aa19.86■□□□□ 0.77
SPSB4-201ENST00000310546 PACSIN2Q9UNF0 486 aaPredicted RBP19.86■□□□□ 0.77
SPSB4-201ENST00000310546 TRPC6Q9Y210 931 aa19.86■□□□□ 0.77
SPSB4-201ENST00000310546 AP1G2O75843 785 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 DNAJC8O75937 253 aaPredicted RBP19.85■□□□□ 0.77
SPSB4-201ENST00000310546 NBPF20Q3BBV1 942 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 C3orf20Q8ND61 904 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 NOX5Q96PH1 765 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 SLC39A2Q9NP94 309 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 SLC4A4Q9Y6R1 1079 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 RAD51CO43502 376 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 FTCDO95954 541 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 PPP2R2AP63151 447 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 ZNF654Q8IZM8 581 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 C1orf131Q8NDD1 294 aaKnown RBP19.85■□□□□ 0.77
SPSB4-201ENST00000310546 CNOT6LQ96LI5 555 aaKnown RBP19.85■□□□□ 0.77
SPSB4-201ENST00000310546 PIH1D3Q9NQM4 214 aaKnown RBP19.85■□□□□ 0.77
SPSB4-201ENST00000310546 PLAGL2Q9UPG8 496 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 JAG2Q9Y219 1238 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 C15orf41Q9Y2V0 281 aa19.85■□□□□ 0.77
SPSB4-201ENST00000310546 V9GY48 417 aaPredicted RBP19.85■□□□□ 0.77
SPSB4-201ENST00000310546 ATP2C1P98194 919 aaPredicted RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 GFPT1Q06210 699 aaPredicted RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 ZNF844Q08AG5 666 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 AKNAD1Q5T1N1 836 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 CCDC63Q8NA47 563 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 PROCA1Q8NCQ7 364 aaPredicted RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 UBLCP1Q8WVY7 318 aaPredicted RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 EBF2Q9HAK2 575 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 HSPA9P38646 679 aaKnown RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 MAGOHP61326 146 aaKnown RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 IL17AQ16552 155 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 FAM196AQ6ZSG2 479 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 DDX42Q86XP3 938 aaKnown RBP eCLIP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 IFNL3Q8IZI9 196 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 SPDYE1Q8NFV5 336 aaPredicted RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 MAGOHBQ96A72 148 aaKnown RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 KDM4CQ9H3R0 1056 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 TAF1DQ9H5J8 278 aaPredicted RBP19.84■□□□□ 0.77
SPSB4-201ENST00000310546 PLCB1Q9NQ66 1216 aa19.84■□□□□ 0.77
SPSB4-201ENST00000310546 EPHB6O15197 1021 aa19.83■□□□□ 0.77
SPSB4-201ENST00000310546 PPIP5K2O43314 1243 aa19.83■□□□□ 0.77
SPSB4-201ENST00000310546 TTI2Q6NXR4 508 aa19.83■□□□□ 0.77
SPSB4-201ENST00000310546 MDM1Q8TC05 714 aa19.83■□□□□ 0.77
SPSB4-201ENST00000310546 STRBPQ96SI9 672 aaKnown RBP19.83■□□□□ 0.77
SPSB4-201ENST00000310546 EPB41L4AQ9HCS5 686 aaPredicted RBP19.83■□□□□ 0.77
SPSB4-201ENST00000310546 CDK17Q00537 523 aa19.83■□□□□ 0.76
SPSB4-201ENST00000310546 ADCY2Q08462 1091 aa19.83■□□□□ 0.76
SPSB4-201ENST00000310546 CHADLQ6NUI6 762 aa19.83■□□□□ 0.76
SPSB4-201ENST00000310546 ARHGEF1Q92888 912 aaKnown RBP19.83■□□□□ 0.76
SPSB4-201ENST00000310546 CCDC47Q96A33 483 aaKnown RBP19.83■□□□□ 0.76
SPSB4-201ENST00000310546 PHF20Q9BVI0 1012 aa19.83■□□□□ 0.76
SPSB4-201ENST00000310546 KRT23Q9C075 422 aa19.83■□□□□ 0.76
SPSB4-201ENST00000310546 MMRN2Q9H8L6 949 aa19.83■□□□□ 0.76
SPSB4-201ENST00000310546 PDE6AP16499 860 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 RRAGAQ7L523 313 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 LPIN2Q92539 896 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 YIPF3Q9GZM5 350 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 CNNM2Q9H8M5 875 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 FBXO3Q9UK99 471 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 SPEF2Q9C093 1822 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 EIF4E1BA6NMX2 242 aaKnown RBP19.82■□□□□ 0.76
SPSB4-201ENST00000310546 SLC1A4P43007 532 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 PHKA1P46020 1223 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 UAP1Q16222 522 aaPredicted RBP19.82■□□□□ 0.76
SPSB4-201ENST00000310546 FAM133BQ5BKY9 247 aaKnown RBP19.82■□□□□ 0.76
SPSB4-201ENST00000310546 RUFY4Q6ZNE9 571 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 PIK3AP1Q6ZUJ8 805 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 ARMC9Q7Z3E5 817 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 C5orf60A6NFR6 353 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 CCT8L1PA6NM43 557 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 DIAPH2O60879 1101 aa19.82■□□□□ 0.76
SPSB4-201ENST00000310546 CDCA2Q69YH5 1023 aaPredicted RBP19.82■□□□□ 0.76
SPSB4-201ENST00000310546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.82■□□□□ 0.76
SPSB4-201ENST00000310546 RIC1Q4ADV7 1423 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 EHHADHQ08426 723 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 PKN1Q16512 942 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 THEMIS2Q5TEJ8 643 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 AGAP11Q8TF27 550 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 P3H4Q92791 437 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 DUSP9Q99956 384 aaKnown RBP19.81■□□□□ 0.76
SPSB4-201ENST00000310546 RNF26Q9BY78 433 aaPredicted RBP19.81■□□□□ 0.76
SPSB4-201ENST00000310546 PANK4Q9NVE7 773 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 F8W031 263 aaPredicted RBP19.81■□□□□ 0.76
SPSB4-201ENST00000310546 H0YGN5 161 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 PALMO75781 387 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 BIRC3Q13489 604 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 CCDC197Q8NCU1 140 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 ETAA1Q9NY74 926 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 NFS1Q9Y697 457 aa19.81■□□□□ 0.76
SPSB4-201ENST00000310546 LRRC53A6NM62 1247 aa19.8■□□□□ 0.76
SPSB4-201ENST00000310546 CTNND1O60716 968 aaKnown RBP19.8■□□□□ 0.76
SPSB4-201ENST00000310546 ERVK-9P63128 1117 aa19.8■□□□□ 0.76
SPSB4-201ENST00000310546 TDRD12Q587J7 1177 aaKnown RBP19.8■□□□□ 0.76
SPSB4-201ENST00000310546 MIIPQ5JXC2 388 aa19.8■□□□□ 0.76
SPSB4-201ENST00000310546 LRIG3Q6UXM1 1119 aa19.8■□□□□ 0.76
SPSB4-201ENST00000310546 ANKS4BQ8N8V4 417 aa19.8■□□□□ 0.76
SPSB4-201ENST00000310546 CCDC26Q8TAB7 109 aa19.8■□□□□ 0.76
SPSB4-201ENST00000310546 ZNF570Q96NI8 536 aa19.8■□□□□ 0.76
SPSB4-201ENST00000310546 PYM1Q9BRP8 204 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms