RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NLRC4Q9NPP4 1024 aa8.93□□□□□ -0.98
VPS41-202ENST00000310301 B4E1Z4 1266 aa8.93□□□□□ -0.98
VPS41-202ENST00000310301 RASSF7Q02833 373 aa8.93□□□□□ -0.98
VPS41-202ENST00000310301 GUCY2DQ02846 1103 aa8.93□□□□□ -0.98
VPS41-202ENST00000310301 ODR4Q5SWX8 454 aa8.93□□□□□ -0.98
VPS41-202ENST00000310301 DIS3L2Q8IYB7 885 aaKnown RBP8.93□□□□□ -0.98
VPS41-202ENST00000310301 LRRC8CQ8TDW0 803 aa8.93□□□□□ -0.98
VPS41-202ENST00000310301 PUS3Q9BZE2 481 aaKnown RBP8.93□□□□□ -0.98
VPS41-202ENST00000310301 INTS9Q9NV88 658 aaKnown RBP8.93□□□□□ -0.98
VPS41-202ENST00000310301 KIAA1468Q9P260 1216 aa8.93□□□□□ -0.98
VPS41-202ENST00000310301 APOEP02649 317 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 PTPROQ16827 1216 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 ARHGEF16Q5VV41 709 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 STAMQ92783 540 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 DPF2Q92785 391 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 SERTAD1Q9UHV2 236 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 AFG3L2Q9Y4W6 797 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 COL14A1Q05707 1796 aaKnown RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 KCNJ18B7U540 433 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 C19orf81C9J6K1 198 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 USP17L10C9JJH3 530 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 JAK2O60674 1132 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 ENTPD3O75355 529 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 FCGRTP55899 365 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 PPARAQ07869 468 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 KCNJ12Q14500 433 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 SPOUT1Q5T280 376 aaKnown RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 CCDC84Q86UT8 332 aaPredicted RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 HAUS7Q99871 368 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 DISP2A7MBM2 1401 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 THAP12O43422 761 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 EVI5O60447 810 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 MAGEA9P43362 315 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 INPP1P49441 399 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 NOGQ13253 232 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 NLRP7Q8WX94 980 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 TRIM6Q9C030 488 aaPredicted RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 TBC1D7Q9P0N9 293 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 CDC23Q9UJX2 597 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 TCP1P17987 556 aaKnown RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 PHBP35232 272 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 ADCY8P40145 1251 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 CAPN12Q6ZSI9 719 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 DYMQ7RTS9 669 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 SCYL3Q8IZE3 742 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 U2AF1L4Q8WU68 220 aaKnown RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 CCPG1Q9ULG6 757 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 RPAP1Q9BWH6 1393 aaPredicted RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 DDNO94850 711 aaPredicted RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 TXKP42681 527 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 TAF12Q16514 161 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 MMS22LQ6ZRQ5 1243 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 SMIM5Q71RC9 77 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 HAUS1Q96CS2 278 aa8.92□□□□□ -0.98
VPS41-202ENST00000310301 GPR101Q96P66 508 aaPredicted RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 LSM14BQ9BX40 385 aaKnown RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 ACTR5Q9H9F9 607 aaPredicted RBP8.92□□□□□ -0.98
VPS41-202ENST00000310301 CCL15-CCL14A0A0B4J2E2 113 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 CCDC169A6NNP5 214 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 MYO1CO00159 1063 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 TLR3O15455 904 aaKnown RBP8.91□□□□□ -0.98
VPS41-202ENST00000310301 DAPK3O43293 454 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 CCL15Q16663 113 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 KLHL29Q96CT2 875 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 ELP3Q9H9T3 547 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 MAP3K7O43318 606 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 ZMYND10O75800 440 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 TTLL1O95922 423 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 CDC25BP30305 580 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 CLCN6P51797 869 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 RPS6KA2Q15349 733 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 HHIPL2Q6UWX4 724 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 ADAT2Q7Z6V5 191 aaKnown RBP8.91□□□□□ -0.98
VPS41-202ENST00000310301 IQCDQ96DY2 449 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 DCUN1D2Q6PH85 259 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 NELFCDQ8IXH7 590 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 HAUS4Q9H6D7 363 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 ANLNQ9NQW6 1124 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 SLIT2O94813 1529 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 CFBP00751 764 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 HARSP12081 509 aaKnown RBP8.91□□□□□ -0.98
VPS41-202ENST00000310301 PFKFB1P16118 471 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 FKBP1BP68106 108 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 MORC3Q14149 939 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 TERF2Q15554 542 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 ANKRD20A4Q4UJ75 823 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 ANKRD20A8PQ5CZ79 823 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 ANKRD20A2Q5SQ80 823 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 ANKRD20A1Q5TYW2 823 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 GABPB2Q8TAK5 448 aaPredicted RBP8.91□□□□□ -0.98
VPS41-202ENST00000310301 ZC3H15Q8WU90 426 aaKnown RBP8.91□□□□□ -0.98
VPS41-202ENST00000310301 CDHR1Q96JP9 859 aa8.91□□□□□ -0.98
VPS41-202ENST00000310301 GLTPD2A6NH11 291 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 USP17L15C9J2P7 530 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 USP17L13C9JLJ4 530 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 USP17L11C9JVI0 530 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 USP17L18D6R9N7 530 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 USP17L22D6RA61 530 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 USP17L17D6RBQ6 530 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 USP17L19D6RCP7 530 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms