RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 FOSP01100 380 aaPredicted RBP18.82■□□□□ 0.6
CHKA-201ENST00000265689 TPM1P09493 284 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 PPP1R2P41236 205 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 EPS15P42566 896 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 FAM83AQ86UY5 434 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 SLFN12Q8IYM2 578 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 GLIS3Q8NEA6 775 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 TBC1D5Q92609 795 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 KIFC2Q96AC6 838 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 LENG9Q96B70 501 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 TUBGCP2Q9BSJ2 902 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 B4DLN1 442 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 CAP2P40123 477 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 MCTP2Q6DN12 878 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 DNAJC19Q96DA6 116 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 CNOT6LQ96LI5 555 aaKnown RBP18.82■□□□□ 0.6
CHKA-201ENST00000265689 NAA15Q9BXJ9 866 aaKnown RBP18.82■□□□□ 0.6
CHKA-201ENST00000265689 LRRC27Q9C0I9 530 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 KDM3AQ9Y4C1 1321 aa18.82■□□□□ 0.6
CHKA-201ENST00000265689 NKRFO15226 690 aaKnown RBP eCLIP18.81■□□□□ 0.61e-8■□□□□ 9.5
CHKA-201ENST00000265689 MED24O75448 989 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 TNIP1Q15025 636 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 LRRC41Q15345 812 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 Q4G0T1 1027 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 CENPPQ6IPU0 288 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 CYP2W1Q8TAV3 490 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 NT5C3AQ9H0P0 336 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 VCPKMTQ9H867 229 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 ABHD10Q9NUJ1 306 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 HACL1Q9UJ83 578 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 ZNF215Q9UL58 517 aaPredicted RBP18.81■□□□□ 0.6
CHKA-201ENST00000265689 TUBB4AP04350 444 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 EHHADHQ08426 723 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 SPIRE1Q08AE8 756 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 NCBP1Q09161 790 aaKnown RBP18.81■□□□□ 0.6
CHKA-201ENST00000265689 CCDC51Q96ER9 411 aa18.81■□□□□ 0.6
CHKA-201ENST00000265689 MRPL44Q9H9J2 332 aaKnown RBP18.81■□□□□ 0.6
CHKA-201ENST00000265689 CFBP00751 764 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 PLA2G4BP0C869 781 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 KRT9P35527 623 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 ERVK-24P63145 666 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 COASYQ13057 564 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 TRIM14Q14142 442 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 NCAPH2Q6IBW4 605 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 GUF1Q8N442 669 aaKnown RBP18.8■□□□□ 0.6
CHKA-201ENST00000265689 FBXO28Q9NVF7 368 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 ADGRG1Q9Y653 693 aa18.8■□□□□ 0.6
CHKA-201ENST00000265689 PHLPP2Q6ZVD8 1323 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 NPHP3-ACAD11A0A0J9YXS1 232 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 A0A0U1RQJ8 604 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 POTEFA5A3E0 1075 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 POTEIP0CG38 1075 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 FECHP22830 423 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 MTIF2P46199 727 aaKnown RBP18.79■□□□□ 0.6
CHKA-201ENST00000265689 POTEGQ6S5H5 508 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 POTEEQ6S8J3 1075 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 CHURC1Q8WUH1 139 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 ATRIPQ8WXE1 791 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 PANK4Q9NVE7 773 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 A0A1W2PQC6 194 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 TTC26A0AVF1 554 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 PIK3CDO00329 1044 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 MSH4O15457 936 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 CCDC175P0C221 793 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 CIITAP33076 1130 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 HIRAP54198 1017 aaPredicted RBP18.79■□□□□ 0.6
CHKA-201ENST00000265689 CACNB1Q02641 598 aaPredicted RBP18.79■□□□□ 0.6
CHKA-201ENST00000265689 PRKG1Q13976 671 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 KIF4BQ2VIQ3 1234 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 FAM114A1Q8IWE2 563 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 RANBP17Q9H2T7 1088 aaKnown RBP18.79■□□□□ 0.6
CHKA-201ENST00000265689 L2HGDHQ9H9P8 463 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 RNF181Q9P0P0 153 aa18.79■□□□□ 0.6
CHKA-201ENST00000265689 GOLGA6L9A6NEM1 432 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 TBX3O15119 743 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 ZNF76P36508 570 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 DNM2P50570 870 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 RAD51AP2Q09MP3 1159 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 MIIPQ5JXC2 388 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 NBPF12Q5TAG4 269 aaPredicted RBP18.78■□□□□ 0.6
CHKA-201ENST00000265689 ANGEL2Q5VTE6 544 aaKnown RBP18.78■□□□□ 0.6
CHKA-201ENST00000265689 GPBP1Q86WP2 473 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 CATSPER3Q86XQ3 398 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 ANKRD7Q92527 254 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 TBC1D7Q9P0N9 293 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHKA-201ENST00000265689 V9GYY5 206 aaPredicted RBP18.78■□□□□ 0.6
CHKA-201ENST00000265689 KLK7P49862 253 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 PSMD2Q13200 908 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 WDR24Q96S15 920 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 NOC4LQ9BVI4 516 aaKnown RBP18.78■□□□□ 0.6
CHKA-201ENST00000265689 FGFBP2Q9BYJ0 223 aa18.78■□□□□ 0.6
CHKA-201ENST00000265689 MEIS1O00470 390 aa18.77■□□□□ 0.6
CHKA-201ENST00000265689 ZNF280AP59817 542 aaPredicted RBP18.77■□□□□ 0.6
CHKA-201ENST00000265689 GNG11P61952 73 aa18.77■□□□□ 0.6
CHKA-201ENST00000265689 MAP3K10Q02779 954 aa18.77■□□□□ 0.6
CHKA-201ENST00000265689 TBC1D8BQ0IIM8 1120 aa18.77■□□□□ 0.6
CHKA-201ENST00000265689 TEPSINQ96N21 525 aa18.77■□□□□ 0.6
CHKA-201ENST00000265689 MAP7D2Q96T17 732 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms