RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 UIMC1Q96RL1 719 aa17.84■□□□□ 0.45
ITGA4-201ENST00000233573 BAG1Q99933 345 aaPredicted RBP17.84■□□□□ 0.45
ITGA4-201ENST00000233573 SRRTQ9BXP5 876 aaKnown RBP17.84■□□□□ 0.45
ITGA4-201ENST00000233573 STAT3P40763 770 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 SPP2Q13103 211 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 CEP135Q66GS9 1140 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 DYMQ7RTS9 669 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 KLRG1Q96E93 195 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 TRIM47Q96LD4 638 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 FAM20AQ96MK3 541 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 PANX2Q96RD6 677 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 KIAA1683Q9H0B3 1180 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 VPS16Q9H269 839 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 PPP2R3BQ9Y5P8 575 aa17.83■□□□□ 0.45
ITGA4-201ENST00000233573 PITPNM2Q9BZ72 1349 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 IGLV3-22A0A075B6J6 115 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 BICDL2A1A5D9 508 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 AKR1B15C9JRZ8 316 aaPredicted RBP17.83■□□□□ 0.44
ITGA4-201ENST00000233573 MSH4O15457 936 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 MED24O75448 989 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 HOXA7P31268 230 aaPredicted RBP17.83■□□□□ 0.44
ITGA4-201ENST00000233573 CENPPQ6IPU0 288 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 ANKRD20A12PQ8NF67 263 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 CYP2W1Q8TAV3 490 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 SLC39A2Q9NP94 309 aa17.83■□□□□ 0.44
ITGA4-201ENST00000233573 PHIPQ8WWQ0 1821 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 POTEB3A0JP26 581 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 POTECB2RU33 542 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 RIOK3O14730 519 aaKnown RBP17.82■□□□□ 0.44
ITGA4-201ENST00000233573 GYPCP04921 128 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 PTPRAP18433 802 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 POTEBQ6S5H4 581 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 ZNF507Q8TCN5 953 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 DCPSQ96C86 337 aaKnown RBP17.82■□□□□ 0.44
ITGA4-201ENST00000233573 PICK1Q9NRD5 415 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 EMILIN3Q9NT22 766 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 GINM1Q9NU53 330 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 VAV3Q9UKW4 847 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 KIAA1024Q9UPX6 916 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 PAXBP1Q9Y5B6 917 aa17.82■□□□□ 0.44
ITGA4-201ENST00000233573 E9PMD0 336 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 FECHP22830 423 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 PSMD2Q13200 908 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 LDHDQ86WU2 507 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 CSGALNACT2Q8N6G5 542 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 HOOK2Q96ED9 719 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 MRPL11Q9Y3B7 192 aaKnown RBP17.81■□□□□ 0.44
ITGA4-201ENST00000233573 ZNF536O15090 1300 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 LGALS16A8MUM7 142 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 GCOM1H8Y6P7 765 aaPredicted RBP17.81■□□□□ 0.44
ITGA4-201ENST00000233573 DYNC1I1O14576 645 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 MFAP3LO75121 409 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 CFBP00751 764 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 POLR2MP0CAP2 368 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 SPATA31C1P0DKV0 1188 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 VCAM1P19320 739 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 SULF1Q8IWU6 871 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 REXO1L1PQ8IX06 675 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 GUF1Q8N442 669 aaKnown RBP17.81■□□□□ 0.44
ITGA4-201ENST00000233573 TANGO6Q9C0B7 1094 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 ZHX2Q9Y6X8 837 aa17.81■□□□□ 0.44
ITGA4-201ENST00000233573 ABCB11O95342 1321 aa17.8■□□□□ 0.44
ITGA4-201ENST00000233573 WDR46O15213 610 aaKnown RBP17.8■□□□□ 0.44
ITGA4-201ENST00000233573 USP2O75604 605 aaPredicted RBP17.8■□□□□ 0.44
ITGA4-201ENST00000233573 SUPT20HL1Q3ZLR7 823 aa17.8■□□□□ 0.44
ITGA4-201ENST00000233573 HAUS3Q68CZ6 603 aa17.8■□□□□ 0.44
ITGA4-201ENST00000233573 PPFIBP1Q86W92 1011 aa17.8■□□□□ 0.44
ITGA4-201ENST00000233573 CATSPER3Q86XQ3 398 aa17.8■□□□□ 0.44
ITGA4-201ENST00000233573 L3MBTL3Q96JM7 780 aaPredicted RBP17.8■□□□□ 0.44
ITGA4-201ENST00000233573 RBBP6Q7Z6E9 1792 aaKnown RBP17.8■□□□□ 0.44
ITGA4-201ENST00000233573 KIF2AO00139 706 aaPredicted RBP17.79■□□□□ 0.44
ITGA4-201ENST00000233573 CCP110O43303 1012 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 PLA2G4BP0C869 781 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 RPA1P27694 616 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 CASP14P31944 242 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 EPHX2P34913 555 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 FXR1P51114 621 aaKnown RBP eCLIP17.79■□□□□ 0.44
ITGA4-201ENST00000233573 COASYQ13057 564 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 FOXR2Q6PJQ5 311 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 KRT26Q7Z3Y9 468 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
ITGA4-201ENST00000233573 LPAR1Q92633 364 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 WDR18Q9BV38 432 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.79■□□□□ 0.44
ITGA4-201ENST00000233573 OTOFQ9HC10 1997 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 RNF225M0QZC1 329 aaPredicted RBP17.79■□□□□ 0.44
ITGA4-201ENST00000233573 ICAM1P05362 532 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 SLC12A3P55017 1021 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 MB21D1Q8N884 522 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 ZNF280CQ8ND82 737 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 RPAP3Q9H6T3 665 aaPredicted RBP17.79■□□□□ 0.44
ITGA4-201ENST00000233573 PCDHA2Q9Y5H9 948 aa17.79■□□□□ 0.44
ITGA4-201ENST00000233573 A0A1W2PQC6 194 aa17.78■□□□□ 0.44
ITGA4-201ENST00000233573 FRMD3A2A2Y4 597 aa17.78■□□□□ 0.44
ITGA4-201ENST00000233573 POTEFA5A3E0 1075 aa17.78■□□□□ 0.44
ITGA4-201ENST00000233573 POTEIP0CG38 1075 aa17.78■□□□□ 0.44
ITGA4-201ENST00000233573 IDEP14735 1019 aa17.78■□□□□ 0.44
ITGA4-201ENST00000233573 CYP11B2P19099 503 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms