RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 GBP6Q6ZN66 633 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 SH3RF1Q7Z6J0 888 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 CCDC84Q86UT8 332 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-214ENST00000637038 DZIP1Q86YF9 867 aaKnown RBP4.43□□□□□ -1.7
SCN1A-214ENST00000637038 ZNF34Q8IZ26 560 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 SLAIN1Q8ND83 568 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 TRIM58Q8NG06 486 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 NEK11Q8NG66 645 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 FUT8Q9BYC5 575 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 NUCKS1Q9H1E3 243 aaKnown RBP4.43□□□□□ -1.7
SCN1A-214ENST00000637038 MKNK2Q9HBH9 465 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 PDE11AQ9HCR9 933 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 C6orf50Q9HD87 102 aa4.43□□□□□ -1.7
SCN1A-214ENST00000637038 NIP7Q9Y221 180 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN1A-214ENST00000637038 WNT7AO00755 349 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 FARP2O94887 1054 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PARP1P09874 1014 aaKnown RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 GUCY1A2P33402 732 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PBX1P40424 430 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 SLC20A2Q08357 652 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 TBC1D8BQ0IIM8 1120 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 FUT2Q10981 343 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 HLFQ16534 295 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 MICALCLQ6ZW33 695 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ANKRD23Q86SG2 305 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ZNF444Q8N0Y2 327 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 CSGALNACT2Q8N6G5 542 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 FAM76AQ8TAV0 307 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 EPSTI1Q96J88 318 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 MRPL44Q9H9J2 332 aaKnown RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 JADE2Q9NQC1 790 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 BIN2Q9UBW5 565 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ADAM21Q9UKJ8 722 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ZBTB1Q9Y2K1 713 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PPP1R3GB7ZBB8 358 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 TEX33O43247 280 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PRKAB2O43741 272 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 HSF2BPO75031 334 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 TRPA1O75762 1119 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 IREB2P48200 963 aaKnown RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 BCAMP50895 628 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ASIC1P78348 528 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ZBED6P86452 979 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 APBA1Q02410 837 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 CHRNDQ07001 517 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 CASP8Q14790 479 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PFKFB3Q16875 520 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 WDR93Q6P2C0 686 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 RAD9BQ6WBX8 426 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 IFNLR1Q8IU57 520 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 SLF2Q8IX21 1173 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 MB21D1Q8N884 522 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ENAHQ8N8S7 591 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 OXER1Q8TDS5 423 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 MFSD14AQ96MC6 490 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 NAP1L4Q99733 375 aaKnown RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 SEZ6LQ9BYH1 1024 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PCDHA4Q9UN74 947 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 FER1L6Q2WGJ9 1857 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 GOLGA6L10A6NI86 522 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 LRRC10BA6NIK2 292 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PSMD14O00487 310 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 KIAA0754O94854 1291 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 IDEP14735 1019 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 TCP1P17987 556 aaKnown RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 EPS15P42566 896 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 NAP1L1P55209 391 aaKnown RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PPFIA1Q13136 1202 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 TNFAIP1Q13829 316 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 IFI16Q16666 785 aaKnown RBP4.42□□□□□ -1.7
SCN1A-214ENST00000637038 CCDC96Q2M329 555 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 CACNA2D4Q7Z3S7 1137 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 SAPCD2Q86UD0 394 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ACRBPQ8NEB7 543 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 PPM1EQ8WY54 764 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 TNFRSF25Q93038 417 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 ABCB6Q9NP58 842 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 RNF14Q9UBS8 474 aa4.42□□□□□ -1.7
SCN1A-214ENST00000637038 GOLGA8KD6RF30 607 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 hCG_1984214I3L0E3 225 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 MAP2K7O14733 419 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 AKR1B10O60218 316 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 GYPCP04921 128 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 ITGB8P26012 769 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 PRPHP41219 470 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 MRPS5P82675 430 aaKnown RBP4.41□□□□□ -1.7
SCN1A-214ENST00000637038 PABPC4Q13310 644 aaKnown RBP eCLIP4.41□□□□□ -1.7
SCN1A-214ENST00000637038 SEC23AQ15436 765 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 BEND6Q5SZJ8 279 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-214ENST00000637038 ZNF662Q6ZS27 426 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 ZNF713Q8N859 430 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-214ENST00000637038 TAF4BQ92750 862 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 NOC4LQ9BVI4 516 aaKnown RBP4.41□□□□□ -1.7
SCN1A-214ENST00000637038 BLZF1Q9H2G9 400 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 DISC1Q9NRI5 854 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 THEGQ9P2T0 379 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 ZNRF3Q9ULT6 936 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 CAPN11Q9UMQ6 739 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 COG5Q9UP83 839 aa4.41□□□□□ -1.7
SCN1A-214ENST00000637038 SMIM22K7EJ46 135 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms