RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CEP85Q6P2H3 762 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 NOL8Q76FK4 1167 aaKnown RBP5.71□□□□□ -1.5
LINC00550-201ENST00000629293 CPXCR1Q8N123 301 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 LCORLQ8N3X6 602 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 GPR108Q9NPR9 543 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 CUEDC1Q9NWM3 386 aaPredicted RBP5.71□□□□□ -1.5
LINC00550-201ENST00000629293 SLC5A4Q9NY91 659 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 CTDP1Q9Y5B0 961 aaPredicted RBP5.71□□□□□ -1.5
LINC00550-201ENST00000629293 DDX60LQ5H9U9 1706 aaKnown RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 PHIPQ8WWQ0 1821 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 MBD4O95243 580 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 RARBP10826 455 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 AKR1B1P15121 316 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 GSPT1P15170 499 aaKnown RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 CAPN2P17655 700 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 KCTD2Q14681 263 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 KIAA1755Q5JYT7 1200 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 TATDN1Q6P1N9 297 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 SLC39A5Q6ZMH5 540 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 XPNPEP3Q9NQH7 507 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 ZHX1Q9UKY1 873 aaPredicted RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 PRRC2BQ5JSZ5 2229 aaKnown RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 SEPT4O43236 478 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 NDUFB5O43674 189 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 CYBAP13498 195 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 TAL1P17542 331 aaPredicted RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 GUCY1A2P33402 732 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 ADD1P35611 737 aaKnown RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 LRRC41Q15345 812 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 LBX2Q6XYB7 198 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 RPAP2Q8IXW5 612 aaPredicted RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 AMOTL1Q8IY63 956 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 CLASRPQ8N2M8 674 aaKnown RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 TMEM87AQ8NBN3 555 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 DDX11Q96FC9 970 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 NUP88Q99567 741 aaPredicted RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 ARHGEF10LQ9HCE6 1279 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 HOMER2Q9NSB8 354 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 GINM1Q9NU53 330 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 TMEM39AQ9NV64 488 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 CDK11BP21127 795 aaKnown RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 PLCB3Q01970 1234 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 RBL2Q08999 1139 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 C12orf42Q96LP6 360 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 MMP19Q99542 508 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 SEMA6BQ9H3T3 888 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 SRA1Q9HD15 236 aaKnown RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 DCP1AQ9NPI6 582 aaPredicted RBP5.7□□□□□ -1.5
LINC00550-201ENST00000629293 PDLIM7Q9NR12 457 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 CNPY2Q9Y2B0 182 aa5.7□□□□□ -1.5
LINC00550-201ENST00000629293 TRIM43BA6NCK2 446 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 CDC45O75419 566 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 IL2RAP01589 272 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 CCDC85BQ15834 202 aaPredicted RBP5.69□□□□□ -1.5
LINC00550-201ENST00000629293 TTC22Q5TAA0 569 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 TMEM179Q6ZVK1 233 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 RNF180Q86T96 592 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 MICALL1Q8N3F8 863 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 RHPN1Q8TCX5 695 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 TRIM43Q96BQ3 446 aaPredicted RBP5.69□□□□□ -1.5
LINC00550-201ENST00000629293 RIOK1Q9BRS2 568 aaKnown RBP5.69□□□□□ -1.5
LINC00550-201ENST00000629293 EHD4Q9H223 541 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 PIF1Q9H611 641 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 CHMP5Q9NZZ3 219 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 PTPRZ1P23471 2315 aaPredicted RBP5.69□□□□□ -1.5
LINC00550-201ENST00000629293 COL2A1P02458 1487 aaPredicted RBP5.69□□□□□ -1.5
LINC00550-201ENST00000629293 MINDY4BA8MYZ0 360 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 STRNO43815 780 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 HOXC6P09630 235 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 ITGB8P26012 769 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 IKQ13123 557 aaPredicted RBP5.69□□□□□ -1.5
LINC00550-201ENST00000629293 FAM83BQ5T0W9 1011 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 ERC1Q8IUD2 1116 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 SLC9A9Q8IVB4 645 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 HSCBQ8IWL3 235 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 MAML3Q96JK9 1138 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 DDX41Q9UJV9 622 aaKnown RBP5.69□□□□□ -1.5
LINC00550-201ENST00000629293 ATAD5Q96QE3 1844 aa5.69□□□□□ -1.5
LINC00550-201ENST00000629293 C6orf222P0C671 652 aaPredicted RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 EEF2P13639 858 aaKnown RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 STAT3P40763 770 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 TMEM132BQ14DG7 1078 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 TTF1Q15361 905 aaPredicted RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 TTYH1Q9H313 450 aaPredicted RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 STARD7Q9NQZ5 370 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 SERTAD1Q9UHV2 236 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 TACC3Q9Y6A5 838 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 SLC4A4Q9Y6R1 1079 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 MYO5AQ9Y4I1 1855 aaKnown RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 MYO7AQ13402 2215 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 GRXCR1A8MXD5 290 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 SORBS3O60504 671 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 PRDM1O75626 825 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 APPP05067 770 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 CDK8P49336 464 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 EPHB4P54760 987 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 FAM109BQ6ICB4 259 aaPredicted RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 CERS3Q8IU89 383 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 DHX38Q92620 1227 aaKnown RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 EMID1Q96A84 441 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms