RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 CAGE1Q8TC20 777 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 SUSD6Q92537 303 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 DHX38Q92620 1227 aaKnown RBP8.6□□□□□ -1.03
TCF4-266ENST00000628689 USP44Q9H0E7 712 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 IGSF5Q9NSI5 407 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 FRYQ5TBA9 3013 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 C5orf67F2Z3F1 127 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 LGR5O75473 907 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
TCF4-266ENST00000628689 GLP2RO95838 553 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 AMHP03971 560 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 RB1P06400 928 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 PTPN11Q06124 597 aaPredicted RBP8.59□□□□□ -1.03
TCF4-266ENST00000628689 GABPAQ06546 454 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 MVPQ14764 893 aaKnown RBP8.59□□□□□ -1.03
TCF4-266ENST00000628689 PTGISQ16647 500 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 CWF19L1Q69YN2 538 aaKnown RBP8.59□□□□□ -1.03
TCF4-266ENST00000628689 EEPD1Q7L9B9 569 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 EFHBQ8N7U6 833 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 FAM133AQ8N9E0 248 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 MARVELD3Q96A59 401 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 YME1L1Q96TA2 773 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 MFSD1Q9H3U5 465 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 BARX2Q9UMQ3 279 aaPredicted RBP8.59□□□□□ -1.03
TCF4-266ENST00000628689 LHX6Q9UPM6 363 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 SORCS3Q9UPU3 1222 aa8.59□□□□□ -1.03
TCF4-266ENST00000628689 PA2G4Q9UQ80 394 aaKnown RBP8.59□□□□□ -1.03
TCF4-266ENST00000628689 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.03
TCF4-266ENST00000628689 LINC00271P0C7V0 271 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 CKBP12277 381 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 NPR3P17342 541 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 AOC1P19801 751 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 CTNNB1P35222 781 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 BMPR1AP36894 532 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 USP5P45974 858 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 EMP3P54852 163 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 MTMR3Q13615 1198 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 RALBP1Q15311 655 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 TRAF7Q6Q0C0 670 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 TMEM179Q6ZVK1 233 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 ADGRD2Q7Z7M1 963 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 CPXCR1Q8N123 301 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 SUMF1Q8NBK3 374 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 FLCNQ8NFG4 579 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 RTKNQ9BST9 563 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 ARHGEF10LQ9HCE6 1279 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 SPEGQ15772 3267 aa8.58□□□□□ -1.04
TCF4-266ENST00000628689 ASB14A6NK59 587 aa8.57□□□□□ -1.04
TCF4-266ENST00000628689 UPP2O95045 317 aa8.57□□□□□ -1.04
TCF4-266ENST00000628689 SP100P23497 879 aaPredicted RBP8.57□□□□□ -1.04
TCF4-266ENST00000628689 ARID4AP29374 1257 aaPredicted RBP8.57□□□□□ -1.04
TCF4-266ENST00000628689 RBL2Q08999 1139 aa8.57□□□□□ -1.04
TCF4-266ENST00000628689 DUSP28Q4G0W2 176 aa8.57□□□□□ -1.04
TCF4-266ENST00000628689 FAM83BQ5T0W9 1011 aa8.57□□□□□ -1.04
TCF4-266ENST00000628689 GDF6Q6KF10 455 aaPredicted RBP8.57□□□□□ -1.04
TCF4-266ENST00000628689 KIAA1211Q6ZU35 1233 aa8.57□□□□□ -1.04
TCF4-266ENST00000628689 FBXO16Q8IX29 292 aaPredicted RBP8.57□□□□□ -1.04
TCF4-266ENST00000628689 DBF4BQ8NFT6 615 aa8.57□□□□□ -1.04
TCF4-266ENST00000628689 TOP1MTQ969P6 601 aa8.57□□□□□ -1.04
TCF4-266ENST00000628689 C11orf84Q9BUA3 381 aaPredicted RBP8.57□□□□□ -1.04
TCF4-266ENST00000628689 CDV3Q9UKY7 258 aaKnown RBP8.57□□□□□ -1.04
TCF4-266ENST00000628689 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.57□□□□□ -1.04
TCF4-266ENST00000628689 NAV1Q8NEY1 1877 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 CYSRT1A8MQ03 144 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 PRR5-ARHGAP8B1AHC4 643 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 E9PSI1 815 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 ATP2A1O14983 1001 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 MMP1P03956 469 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 DNAJB1P25685 340 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 NRIP1P48552 1158 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 CPT1AP50416 773 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 FOSBP53539 338 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 ARHGAP8P85298 464 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 RBM10P98175 930 aaKnown RBP8.56□□□□□ -1.04
TCF4-266ENST00000628689 ICA1Q05084 483 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 EXOSC9Q06265 439 aaKnown RBP8.56□□□□□ -1.04
TCF4-266ENST00000628689 PPM1JQ5JR12 505 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 CHST13Q8NET6 341 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 NEUROD6Q96NK8 337 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 SLF1Q9BQI6 1058 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 SH2D4AQ9H788 454 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 RAVER2Q9HCJ3 691 aaKnown RBP8.56□□□□□ -1.04
TCF4-266ENST00000628689 SNRKQ9NRH2 765 aa8.56□□□□□ -1.04
TCF4-266ENST00000628689 USP17L12C9JPN9 530 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 USP17L21D6R901 530 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 AKR1B1P15121 316 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 CYP7A1P22680 504 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 CHMP4BP1P59074 171 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 TFCP2Q12800 502 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 RBM23Q86U06 439 aaKnown RBP8.55□□□□□ -1.04
TCF4-266ENST00000628689 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 MIGA1Q8NAN2 632 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 RIN2Q8WYP3 895 aaPredicted RBP8.55□□□□□ -1.04
TCF4-266ENST00000628689 PPP2R3CQ969Q6 453 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 S1PR5Q9H228 398 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 FBXO40Q9UH90 709 aa8.55□□□□□ -1.04
TCF4-266ENST00000628689 PLAGL2Q9UPG8 496 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms