RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CAPN12Q6ZSI9 719 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 SLC8A1P32418 973 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 CFAP61Q8NHU2 1237 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 TMEM206Q9H813 350 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 LRRC4Q9HBW1 653 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 NDUFB9Q9Y6M9 179 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 SUN1O94901 812 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 SURF1Q15526 300 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 GPIHBP1Q8IV16 184 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 ELMOD1Q8N336 334 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 MYRIPQ8NFW9 859 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 WDR11Q9BZH6 1224 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 MED4Q9NPJ6 270 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 KIAA0232Q92628 1395 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 PNMA6EA0A0J9YXQ4 647 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 CHL1O00533 1208 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 PYGLP06737 847 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 MAPK4P31152 587 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 ELF1P32519 619 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 ZNF445P59923 1031 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 GABPB1Q06547 395 aaPredicted RBP12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 ARHGEF18Q6ZSZ5 1173 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 NRBF2Q96F24 287 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 ACCSQ96QU6 501 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 GYG1P46976 350 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 CXorf38Q8TB03 319 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 FGD4Q96M96 766 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 XAB2Q9HCS7 855 aaKnown RBP12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 SESN3P58005 492 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 PPARDQ03181 441 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 GPKOWQ92917 476 aaPredicted RBP eCLIP12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 TNKSO95271 1327 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 ABCC12Q96J65 1359 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 HNRNPCL2B2RXH8 293 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 HNRNPCL1O60812 293 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 HSP90AA5PQ58FG0 334 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 IREB2P48200 963 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 GOLGA8FQ08AF8 430 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 GOLGA8DPQ0D2H9 430 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 ADAT2Q7Z6V5 191 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 CCNYQ8ND76 341 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 EIF2AQ9BY44 585 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 JRKLQ9Y4A0 524 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 PAMP19021 973 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 BCAMP50895 628 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 BZW1Q7L1Q6 419 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 ACTN1P12814 892 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 SLC4A1P02730 911 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 CMTR1Q8N1G2 835 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 GJA10Q969M2 543 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 PPP1R9AQ9ULJ8 1098 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 H2AFZP0C0S5 128 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 FAM26FQ5R3K3 315 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 H2AFVQ71UI9 128 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 GANCQ8TET4 914 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 DHX38Q92620 1227 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 CAPS2Q9BXY5 557 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 ABT1Q9ULW3 272 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 APOEP02649 317 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 TRAPPC10P48553 1259 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 SF3A3Q12874 501 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 ME3Q16798 604 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 HP1BP3Q5SSJ5 553 aaPredicted RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 SIX6OS1Q8N1H7 587 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 SYMPKQ92797 1274 aaKnown RBP12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 SYNMO15061 1565 aa12.1□□□□□ -0.47
CCDC144B-208ENST00000618081 POC1B-GALNT4F8VUJ3 575 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 M0R2C6 588 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 APBA1Q02410 837 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 SLC12A1Q13621 1099 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 PLEKHA4Q9H4M7 779 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 SUCLA2Q9P2R7 463 aaPredicted RBP12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 TLK1Q9UKI8 766 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 RNF219Q5W0B1 726 aaPredicted RBP12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 LARP4BQ92615 738 aaKnown RBP12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 FAM149B1Q96BN6 582 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 CNOT6LQ96LI5 555 aaKnown RBP12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 NR2F2P24468 414 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 TEKT2Q9UIF3 430 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 CHEK2O96017 543 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 CHRNDQ07001 517 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 RNF168Q8IYW5 571 aaPredicted RBP12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 MCUQ8NE86 351 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 GCNT4Q9P109 453 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 hCG_1984214I3L0E3 225 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms