RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 BAATQ14032 418 aaPredicted RBP17.19■□□□□ 0.34
UBXN1-218ENST00000616865 TOB2Q14106 344 aaPredicted RBP17.19■□□□□ 0.34
UBXN1-218ENST00000616865 PWP2Q15269 919 aaKnown RBP17.19■□□□□ 0.34
UBXN1-218ENST00000616865 TTBK2Q6IQ55 1244 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 BTNL9Q6UXG8 535 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 SGMS1Q86VZ5 419 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 LARP6Q9BRS8 491 aaKnown RBP17.19■□□□□ 0.34
UBXN1-218ENST00000616865 SENP2Q9HC62 589 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 SCN10AQ9Y5Y9 1956 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 SCN5AQ14524 2016 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 DDAH1O94760 285 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 SLC16A2P36021 539 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 MCM2P49736 904 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 PURAQ00577 322 aaKnown RBP17.18■□□□□ 0.34
UBXN1-218ENST00000616865 SYDE2Q5VT97 1194 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 MICU3Q86XE3 530 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 RPUSD2Q8IZ73 545 aaKnown RBP17.18■□□□□ 0.34
UBXN1-218ENST00000616865 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
UBXN1-218ENST00000616865 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 SCLYQ96I15 445 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 AGXT2Q9BYV1 514 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 POLR3EQ9NVU0 708 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 SLC4A7Q9Y6M7 1214 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 TTC28Q96AY4 2481 aa17.18■□□□□ 0.34
UBXN1-218ENST00000616865 REV3LO60673 3130 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 PTPDC1A2A3K4 754 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 XIRP2A4UGR9 3374 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 GOLGA8AA7E2F4 631 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 PFKMP08237 780 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 PARP1P09874 1014 aaKnown RBP17.17■□□□□ 0.34
UBXN1-218ENST00000616865 IGFBP4P22692 258 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 KIF5BP33176 963 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 CPT1AP50416 773 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 RABGGTBP53611 331 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 CCDC85BQ15834 202 aaPredicted RBP17.17■□□□□ 0.34
UBXN1-218ENST00000616865 PPP2R2DQ66LE6 453 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 SLC30A10Q6XR72 485 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 ASB2Q96Q27 587 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 MYL10Q9BUA6 226 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 WDR11Q9BZH6 1224 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 TRMT13Q9NUP7 481 aaKnown RBP17.17■□□□□ 0.34
UBXN1-218ENST00000616865 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 LIMCH1Q9UPQ0 1083 aa17.17■□□□□ 0.34
UBXN1-218ENST00000616865 FRMPD2Q68DX3 1309 aaPredicted RBP17.17■□□□□ 0.34
UBXN1-218ENST00000616865 RBM47A0AV96 593 aaKnown RBP17.16■□□□□ 0.34
UBXN1-218ENST00000616865 ZBBXA8MT70 800 aa17.16■□□□□ 0.34
UBXN1-218ENST00000616865 SUPT20HL2P0C7V6 817 aa17.16■□□□□ 0.34
UBXN1-218ENST00000616865 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.34
UBXN1-218ENST00000616865 STK3Q13188 491 aa17.16■□□□□ 0.34
UBXN1-218ENST00000616865 ASPRV1Q53RT3 343 aa17.16■□□□□ 0.34
UBXN1-218ENST00000616865 ZNF274Q96GC6 653 aaPredicted RBP17.16■□□□□ 0.34
UBXN1-218ENST00000616865 ZSCAN31Q96LW9 406 aaPredicted RBP17.16■□□□□ 0.34
UBXN1-218ENST00000616865 GPCPD1Q9NPB8 672 aa17.16■□□□□ 0.34
UBXN1-218ENST00000616865 PCDHA11Q9Y5I1 949 aa17.16■□□□□ 0.34
UBXN1-218ENST00000616865 MYO9BQ13459 2157 aa17.16■□□□□ 0.34
UBXN1-218ENST00000616865 MYL3P08590 195 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 PDHBP11177 359 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 CYP2C9P11712 490 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 MYOGP15173 224 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 RXRAP19793 462 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 CALML3P27482 149 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 RTN1Q16799 776 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
UBXN1-218ENST00000616865 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 OR6J1Q8NGC5 347 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 ADAMTS19Q8TE59 1207 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 CLEC4DQ8WXI8 215 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
UBXN1-218ENST00000616865 MTG1Q9BT17 334 aaPredicted RBP17.15■□□□□ 0.34
UBXN1-218ENST00000616865 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
UBXN1-218ENST00000616865 CCDC196A0A1B0GTZ2 297 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 ATP2A2P16615 1042 aaKnown RBP17.14■□□□□ 0.33
UBXN1-218ENST00000616865 PDIA3P30101 505 aaKnown RBP17.14■□□□□ 0.33
UBXN1-218ENST00000616865 GNAQP50148 359 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 RCAN1P53805 252 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 CCT2P78371 535 aaKnown RBP17.14■□□□□ 0.33
UBXN1-218ENST00000616865 MRPS5P82675 430 aaKnown RBP17.14■□□□□ 0.33
UBXN1-218ENST00000616865 TROAPQ12815 778 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 TTLL4Q14679 1199 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 GRM4Q14833 912 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 PPP2R5BQ15173 497 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 FANCBQ8NB91 859 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 RBM28Q9NW13 759 aaKnown RBP17.14■□□□□ 0.33
UBXN1-218ENST00000616865 PNMA2Q9UL42 364 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 TPCN1Q9ULQ1 816 aa17.14■□□□□ 0.33
UBXN1-218ENST00000616865 CPLX1O14810 134 aa17.13■□□□□ 0.33
UBXN1-218ENST00000616865 NKRFO15226 690 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBXN1-218ENST00000616865 DHX16O60231 1041 aaKnown RBP17.13■□□□□ 0.33
UBXN1-218ENST00000616865 GOLGA8HP0CJ92 632 aa17.13■□□□□ 0.33
UBXN1-218ENST00000616865 EDNRBP24530 442 aa17.13■□□□□ 0.33
UBXN1-218ENST00000616865 EVCP57679 992 aa17.13■□□□□ 0.33
UBXN1-218ENST00000616865 RPS6P62753 249 aaKnown RBP17.13■□□□□ 0.33
UBXN1-218ENST00000616865 PDE4DQ08499 809 aa17.13■□□□□ 0.33
UBXN1-218ENST00000616865 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
UBXN1-218ENST00000616865 BRDTQ58F21 947 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-218ENST00000616865 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms