RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 PCDHB13Q9Y5F0 798 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 SOS2Q07890 1332 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 PPM1FP49593 454 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 PPARAQ07869 468 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 EHHADHQ08426 723 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 SLC39A14Q15043 492 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 CABP7Q86V35 215 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 CCDC125Q86Z20 511 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 FMO2Q99518 471 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ST7Q9NRC1 585 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 DIS3Q9Y2L1 958 aaKnown RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 NOP56O00567 594 aaKnown RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 FOSP01100 380 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 GSTA2P09210 222 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 KRT5P13647 590 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ATF7P17544 494 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 SLC1A4P43007 532 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 NR1H3Q13133 447 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 BEND6Q5SZJ8 279 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 NUGGCQ68CJ6 796 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ANO5Q75V66 913 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 CCDC89Q8N998 374 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 SYT2Q8N9I0 419 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 U2AF1L4Q8WU68 220 aaKnown RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 PDP2Q9P2J9 529 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 TSC22D4Q9Y3Q8 395 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 GYG2O15488 501 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 MFAP3LO75121 409 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 TRAPPC10P48553 1259 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 NOSTRINQ8IVI9 506 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ACRBPQ8NEB7 543 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 SAMD9LQ8IVG5 1584 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 MYL1P05976 194 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 MCF2P10911 925 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 MDH1P40925 334 aaKnown RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 INPP1P49441 399 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 VASPP50552 380 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 ZBED6P86452 979 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 NAIF1Q69YI7 327 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 OTUD7BQ6GQQ9 843 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 SNX29Q8TEQ0 813 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 NUDCD1Q96RS6 583 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 HAUS7Q99871 368 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 DBNDD2Q9BQY9 259 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 METTL14Q9HCE5 456 aaKnown RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 SLC40A1Q9NP59 571 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 GPCPD1Q9NPB8 672 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 TBC1D23Q9NUY8 699 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 TARBP1Q13395 1621 aaKnown RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 DIAPH2O60879 1101 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 PHKG2P15735 406 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 UBE3CQ15386 1083 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 PITPNM3Q9BZ71 974 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 NDE1Q9NXR1 346 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 NFU1Q9UMS0 254 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 LEMD3Q9Y2U8 911 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 PCDHA5Q9Y5H7 936 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 V9GY48 417 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 ADCY10Q96PN6 1610 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 GRID2IPA4D2P6 1211 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 E7ENQ6 273 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 RCN2Q14257 317 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 GRAMD1BQ3KR37 738 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 AGGF1Q8N302 714 aaeCLIP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 KCNV2Q8TDN2 545 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 FAM227BQ96M60 508 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 PLIN2Q99541 437 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 MRPL46Q9H2W6 279 aaKnown RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 KIF9Q9HAQ2 790 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 NLRC4Q9NPP4 1024 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 NDUFA13Q9P0J0 144 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 STAP2Q9UGK3 403 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 ZNF532Q9HCE3 1301 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 GEN1Q17RS7 908 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 REXO1Q8N1G1 1221 aaKnown RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 CATSPER1Q8NEC5 780 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 KIFC2Q96AC6 838 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 IL17RAQ96F46 866 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 FAM89AQ96GI7 184 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 CCDC138Q96M89 665 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 UIMC1Q96RL1 719 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 ZSCAN10Q96SZ4 725 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 KCNF1Q9H3M0 494 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 IFT122Q9HBG6 1241 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 LRRIQ3A6PVS8 624 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-211ENST00000613795 RASSF7Q02833 373 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 TMEM154Q6P9G4 183 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 LRIG3Q6UXM1 1119 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 CNKSR1Q969H4 720 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 SGSM3Q96HU1 749 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 CHAMP1Q96JM3 812 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 CCDC17Q96LX7 622 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 FAM96AQ9H5X1 160 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 ATP6V0A4Q9HBG4 840 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 ANLNQ9NQW6 1124 aa7.44□□□□□ -1.22
CLCN3-211ENST00000613795 WDR17Q8IZU2 1322 aa7.43□□□□□ -1.22
CLCN3-211ENST00000613795 TET3O43151 1660 aa7.43□□□□□ -1.22
CLCN3-211ENST00000613795 E7EWF7 191 aa7.43□□□□□ -1.22
CLCN3-211ENST00000613795 KRT75O95678 551 aa7.43□□□□□ -1.22
CLCN3-211ENST00000613795 LONP1P36776 959 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms