RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 COL20A1Q9P218 1284 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 LOC285556D6RIA3 1793 aa19.89■□□□□ 0.78
SHKBP1-224ENST00000600718 PTPRFP10586 1907 aa19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 SMC2O95347 1197 aa19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 RPS6P62753 249 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 IRX3P78415 501 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 SNAPC2Q13487 334 aa19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 NT5DC1Q5TFE4 455 aa19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 SMARCE1Q969G3 411 aa19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 MMTAG2Q9BU76 263 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 DNAJC25Q9H1X3 360 aa19.89■□□□□ 0.77
SHKBP1-224ENST00000600718 IGLV3-22A0A075B6J6 115 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 SARSP49591 514 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 ZNF165P49910 485 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 MOGSQ13724 837 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 KRT79Q5XKE5 535 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 GRAMD1CQ8IYS0 662 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 NAT10Q9H0A0 1025 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 SLC26A4O43511 780 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 PRR29P0C7W0 189 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 GJA5P36382 358 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 AFMP43652 599 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 PLS1Q14651 629 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 CEP55Q53EZ4 464 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 NSMFQ6X4W1 530 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 SPATA20Q8TB22 786 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 ANP32BQ92688 251 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 ASCC2Q9H1I8 757 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 MAGEF1Q9HAY2 307 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 CBX8Q9HC52 389 aa19.88■□□□□ 0.77
SHKBP1-224ENST00000600718 FRMPD4Q14CM0 1322 aa19.87■□□□□ 0.77
SHKBP1-224ENST00000600718 BIN1O00499 593 aa19.87■□□□□ 0.77
SHKBP1-224ENST00000600718 MSH4O15457 936 aa19.87■□□□□ 0.77
SHKBP1-224ENST00000600718 OSBPP22059 807 aa19.87■□□□□ 0.77
SHKBP1-224ENST00000600718 PLA2G4DQ86XP0 818 aa19.87■□□□□ 0.77
SHKBP1-224ENST00000600718 CHST13Q8NET6 341 aa19.87■□□□□ 0.77
SHKBP1-224ENST00000600718 ACAD9Q9H845 621 aa19.87■□□□□ 0.77
SHKBP1-224ENST00000600718 POTEMA6NI47 508 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 MEIS1O00470 390 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 CELF2O95319 508 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 PLCG1P19174 1290 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 UBXN2AP68543 259 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 BAATQ14032 418 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 NAALADL2Q58DX5 795 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 SLC30A10Q6XR72 485 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 TRIML1Q8N9V2 468 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 CYP2W1Q8TAV3 490 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 TAAR1Q96RJ0 339 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 STK24Q9Y6E0 443 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 GTPBP6O43824 516 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 SETQ01105 290 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 DPYDQ12882 1025 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 PCNX4Q63HM2 1172 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 GPAT2Q6NUI2 795 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 C11orf57Q6ZUT1 292 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 NIPA1Q7RTP0 329 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 RIOX2Q8IUF8 465 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 GJA10Q969M2 543 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 MXRA8Q9BRK3 442 aa19.86■□□□□ 0.77
SHKBP1-224ENST00000600718 COL11A1P12107 1806 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 MYL1P05976 194 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 HERVK_113P62684 666 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 POTEEQ6S8J3 1075 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 SNX29Q8TEQ0 813 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 CDK5RAP3Q96JB5 506 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 GSDMAQ96QA5 445 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 RMDN3Q96TC7 470 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 PLIN2Q99541 437 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 BTBD7Q9P203 1132 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 MAN1B1Q9UKM7 699 aa19.85■□□□□ 0.77
SHKBP1-224ENST00000600718 A0A087WWV3 80 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 GRB10Q13322 594 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 DPCR1Q3MIW9 517 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 CHADLQ6NUI6 762 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 XRRA1Q6P2D8 792 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 ZNF526Q8TF50 670 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 BPIFA3Q9BQP9 254 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 KBTBD4Q9NVX7 518 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 STK17AQ9UEE5 414 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 FBXO40Q9UH90 709 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 BCRP11274 1271 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 CETPP11597 493 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 HYIQ5T013 277 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 ARHGEF16Q5VV41 709 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 ISM2Q6H9L7 571 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 SLC5A5Q92911 643 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 PNMA5Q96PV4 448 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 MTRQ99707 1265 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 PXMP2Q9NR77 195 aa19.84■□□□□ 0.77
SHKBP1-224ENST00000600718 RBBP6Q7Z6E9 1792 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 ITGBL1O95965 494 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 GTF2A2P52657 109 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 SPIRE1Q08AE8 756 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 MORC3Q14149 939 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 IQCB1Q15051 598 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 PGM5Q15124 567 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 LUZP1Q86V48 1076 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 STAMQ92783 540 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 UIMC1Q96RL1 719 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 SPATC1LQ9H0A9 340 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms