RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 ARHGEF16Q5VV41 709 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 Q7L0L9 218 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 HEATR3Q7Z4Q2 680 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 CUL5Q93034 780 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 TAAR1Q96RJ0 339 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 MAF1Q9H063 256 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 GRIN2DO15399 1336 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 EYSQ5T1H1 3165 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 ZEB2O60315 1214 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 CDC27P30260 824 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 HOXA13P31271 388 aaPredicted RBP17.78■□□□□ 0.44
XRCC1-206ENST00000597811 ADD1P35611 737 aaKnown RBP17.78■□□□□ 0.44
XRCC1-206ENST00000597811 RCAN1P53805 252 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 AKAP17AQ02040 695 aaKnown RBP17.78■□□□□ 0.44
XRCC1-206ENST00000597811 STK3Q13188 491 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 FCHSD1Q86WN1 690 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 SLC43A3Q8NBI5 491 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 SMARCC2Q8TAQ2 1214 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 NSUN6Q8TEA1 469 aaKnown RBP17.78■□□□□ 0.44
XRCC1-206ENST00000597811 RMDN3Q96TC7 470 aa17.78■□□□□ 0.44
XRCC1-206ENST00000597811 UPF2Q9HAU5 1272 aaKnown RBP17.78■□□□□ 0.44
XRCC1-206ENST00000597811 V9GY48 417 aaPredicted RBP17.78■□□□□ 0.44
XRCC1-206ENST00000597811 ARIH2O95376 493 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 TIMP1P01033 207 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 CD4P01730 458 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.44
XRCC1-206ENST00000597811 PSMC6P62333 389 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 ITGA7Q13683 1181 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 TOB2Q14106 344 aaPredicted RBP17.77■□□□□ 0.44
XRCC1-206ENST00000597811 FBXL16Q8N461 479 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 DEFB123Q8N688 67 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 OR6J1Q8NGC5 347 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 SCFD2Q8WU76 684 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 COPS5Q92905 334 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 AGXT2Q9BYV1 514 aa17.77■□□□□ 0.44
XRCC1-206ENST00000597811 CNTNAP5Q8WYK1 1306 aa17.76■□□□□ 0.43
XRCC1-206ENST00000597811 CPLX1O14810 134 aa17.76■□□□□ 0.43
XRCC1-206ENST00000597811 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
XRCC1-206ENST00000597811 HSD17B4P51659 736 aa17.76■□□□□ 0.43
XRCC1-206ENST00000597811 FPGSQ05932 587 aa17.76■□□□□ 0.43
XRCC1-206ENST00000597811 GPKOWQ92917 476 aaPredicted RBP eCLIP17.76■□□□□ 0.43
XRCC1-206ENST00000597811 MAP3K20Q9NYL2 800 aaKnown RBP17.76■□□□□ 0.43
XRCC1-206ENST00000597811 NKRFO15226 690 aaKnown RBP eCLIP17.75■□□□□ 0.43
XRCC1-206ENST00000597811 TLR3O15455 904 aaKnown RBP17.75■□□□□ 0.43
XRCC1-206ENST00000597811 PPFIA3O75145 1194 aa17.75■□□□□ 0.43
XRCC1-206ENST00000597811 TXNP10599 105 aaKnown RBP17.75■□□□□ 0.43
XRCC1-206ENST00000597811 MYCLP12524 364 aaPredicted RBP17.75■□□□□ 0.43
XRCC1-206ENST00000597811 CPT1AP50416 773 aa17.75■□□□□ 0.43
XRCC1-206ENST00000597811 NEK4P51957 841 aa17.75■□□□□ 0.43
XRCC1-206ENST00000597811 NAPAP54920 295 aa17.75■□□□□ 0.43
XRCC1-206ENST00000597811 PURAQ00577 322 aaKnown RBP17.75■□□□□ 0.43
XRCC1-206ENST00000597811 GHRHRQ02643 423 aa17.75■□□□□ 0.43
XRCC1-206ENST00000597811 ANKRD1Q15327 319 aa17.75■□□□□ 0.43
XRCC1-206ENST00000597811 CPLX2Q6PUV4 134 aaKnown RBP17.75■□□□□ 0.43
XRCC1-206ENST00000597811 SAMD3Q8N6K7 520 aa17.75■□□□□ 0.43
XRCC1-206ENST00000597811 IWS1Q96ST2 819 aa17.75■□□□□ 0.43
XRCC1-206ENST00000597811 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
XRCC1-206ENST00000597811 FAM217BQ9NTX9 383 aaPredicted RBP17.75■□□□□ 0.43
XRCC1-206ENST00000597811 UNC80Q8N2C7 3258 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 MYL3P08590 195 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 TTLL4Q14679 1199 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 STXBP2Q15833 593 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 MFSD5Q6N075 450 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 CCDC62Q6P9F0 684 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 SEPT14Q6ZU15 432 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 SLC26A6Q9BXS9 759 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 PPP1R12CQ9BZL4 782 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 SLKQ9H2G2 1235 aaPredicted RBP17.74■□□□□ 0.43
XRCC1-206ENST00000597811 PSTPIP2Q9H939 334 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 PXMP2Q9NR77 195 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 POLR3EQ9NVU0 708 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 A0A0C4DFX4 3053 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 SCN5AQ14524 2016 aa17.74■□□□□ 0.43
XRCC1-206ENST00000597811 DOCK5Q9H7D0 1870 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 TRIP12Q14669 1992 aaPredicted RBP17.73■□□□□ 0.43
XRCC1-206ENST00000597811 B4GALT4O60513 344 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 AK2P54819 239 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 WWC2Q6AWC2 1192 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 PHKBQ93100 1093 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 ZNF274Q96GC6 653 aaPredicted RBP17.73■□□□□ 0.43
XRCC1-206ENST00000597811 TRPV6Q9H1D0 765 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 MTMR10Q9NXD2 777 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 GBF1Q92538 1859 aa17.73■□□□□ 0.43
XRCC1-206ENST00000597811 A6NJR5 290 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 NR3C2P08235 984 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 CSF2RAP15509 400 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 CYP2C18P33260 490 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 FUT2Q10981 343 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 LY6KQ17RY6 165 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 TRIM22Q8IYM9 498 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 RNPC3Q96LT9 517 aaKnown RBP17.72■□□□□ 0.43
XRCC1-206ENST00000597811 MTG1Q9BT17 334 aaPredicted RBP17.72■□□□□ 0.43
XRCC1-206ENST00000597811 SEZ6LQ9BYH1 1024 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 UMODL1Q5DID0 1318 aa17.72■□□□□ 0.43
XRCC1-206ENST00000597811 TANC1Q9C0D5 1861 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 SPDYE3A6NKU9 549 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 hCG_1984214I3L0E3 225 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 SCG2P13521 617 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms