RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 PDE8BO95263 885 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 CTAGE8P0CG41 777 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 CCDC166P0CW27 439 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 GHRP10912 638 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 SH3BGRP55822 239 aaPredicted RBP11□□□□□ -0.65
ZNF540-203ENST00000586134 HUNKP57058 714 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 SGSM1Q2NKQ1 1148 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 PPP1R15BQ5SWA1 713 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 EMC10Q5UCC4 262 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 C11orf57Q6ZUT1 292 aaPredicted RBP11□□□□□ -0.65
ZNF540-203ENST00000586134 FBXO33Q7Z6M2 555 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 CTAGE6Q86UF2 777 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 CTAGE4Q8IX94 777 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 MAIP1Q8WWC4 291 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 OPTNQ96CV9 577 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 MTRQ99707 1265 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 PCDH18Q9HCL0 1135 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 LIMCH1Q9UPQ0 1083 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 PCNTO95613 3336 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 UNCXA6NJT0 531 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CIAO1O76071 339 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 MBD4O95243 580 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 ANP32DO95626 131 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 HIBADHP31937 336 aaKnown RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 STIP1P31948 543 aaKnown RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 KIF5BP33176 963 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 RFX5P48382 616 aaPredicted RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 PHEXP78562 749 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 MRPS35P82673 323 aaKnown RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 NAA35Q5VZE5 725 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CCDC12Q8WUD4 166 aaPredicted RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 FAM84BQ96KN1 310 aaPredicted RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CORO1BQ9BR76 489 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 PUS3Q9BZE2 481 aaKnown RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 SLC5A4Q9NY91 659 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 TUBGCP4Q9UGJ1 667 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 TARSL2A2RTX5 802 aaKnown RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CBFA2T2O43439 604 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 TMCC1O94876 653 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 UBTFL1P0CB47 393 aaPredicted RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 HSPA8P11142 646 aaKnown RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 GGCXP38435 758 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CCNG1P51959 295 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 HDLBPQ00341 1268 aaKnown RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 ADCY1Q08828 1119 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 APBB1IPQ7Z5R6 666 aaPredicted RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CCDC65Q8IXS2 484 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CERS5Q8N5B7 392 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CCDC155Q8N6L0 562 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 ZBTB8BQ8NAP8 495 aaPredicted RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 CCDC148Q8NFR7 591 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 PPP2R3CQ969Q6 453 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 ZNF408Q9H9D4 720 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 DDX25Q9UHL0 483 aaKnown RBP10.99□□□□□ -0.65
ZNF540-203ENST00000586134 SUGT1Q9Y2Z0 365 aa10.99□□□□□ -0.65
ZNF540-203ENST00000586134 ASTN2O75129 1339 aaPredicted RBP10.98□□□□□ -0.65
ZNF540-203ENST00000586134 FAM155AB1AL88 458 aaPredicted RBP10.98□□□□□ -0.65
ZNF540-203ENST00000586134 SNAP23O00161 211 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 EYA2O00167 538 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 MYO1BO43795 1136 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 SLC10A3P09131 477 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 PDCP20941 246 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 FGFR2P21802 821 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 FLT3P36888 993 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 NLRP5P59047 1200 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 MXRA7P84157 204 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 SLC7A5Q01650 507 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 ZNF473Q8WTR7 871 aaKnown RBP10.98□□□□□ -0.65
ZNF540-203ENST00000586134 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 STAMBPL1Q96FJ0 436 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 SPATA32Q96LK8 384 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
ZNF540-203ENST00000586134 ZNF570Q96NI8 536 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 TRAPPC9Q96Q05 1148 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 MXD3Q9BW11 206 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 MRIQ9BWK5 157 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 XPO4Q9C0E2 1151 aaKnown RBP10.98□□□□□ -0.65
ZNF540-203ENST00000586134 OSBPL3Q9H4L5 887 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 ZNHIT6Q9NWK9 470 aaKnown RBP10.98□□□□□ -0.65
ZNF540-203ENST00000586134 SAGE1Q9NXZ1 904 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 GALNT8Q9NY28 637 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 AATFQ9NY61 560 aaKnown RBP eCLIP10.98□□□□□ -0.65
ZNF540-203ENST00000586134 SERPINA10Q9UK55 444 aa10.98□□□□□ -0.65
ZNF540-203ENST00000586134 STX10O60499 249 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 PFKFB2O60825 505 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 XBP1P17861 261 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 LMNB2Q03252 620 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 PTPN12Q05209 780 aaKnown RBP10.97□□□□□ -0.65
ZNF540-203ENST00000586134 MTX1Q13505 466 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 PUM3Q15397 648 aaKnown RBP10.97□□□□□ -0.65
ZNF540-203ENST00000586134 DLGAP5Q15398 846 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 CAVIN4Q5BKX8 364 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 CMPK2Q5EBM0 449 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 METTL24Q5JXM2 366 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 SH2D4BQ5SQS7 431 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 TMEM110Q86TL2 294 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
ZNF540-203ENST00000586134 SIRT2Q8IXJ6 389 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms