RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ARHGAP4P98171 946 aa26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 MIGA2Q7L4E1 593 aa26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 CRYGNQ8WXF5 182 aa26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 MAP7D2Q96T17 732 aa26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 KCNMB3Q9NPA1 279 aa26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 HERC5Q9UII4 1024 aaKnown RBP26.43■■□□□ 1.82
NPLOC4-217ENST00000574897 POTEB3A0JP26 581 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 POTECB2RU33 542 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 KRT9P35527 623 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 GNG11P61952 73 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 LRRC41Q15345 812 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 POTEBQ6S5H4 581 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 LZTFL1Q9NQ48 299 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 SSBP05455 408 aaKnown RBP eCLIP26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 TPM1P09493 284 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 KLK7P49862 253 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 USP11P51784 963 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 PRR16Q569H4 304 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 FAM151AQ8WW52 585 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 NAA15Q9BXJ9 866 aaKnown RBP26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 GLT8D2Q9H1C3 349 aa26.42■■□□□ 1.82
NPLOC4-217ENST00000574897 TTC26A0AVF1 554 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 BICDL2A1A5D9 508 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 CCDC175P0C221 793 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 SYCP1Q15431 976 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 ZYXQ15942 572 aaKnown RBP26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 PDCL2Q8N4E4 241 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 OGFOD1Q8N543 542 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 ACRBPQ8NEB7 543 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 KIAA1024Q9UPX6 916 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 KIF13BQ9NQT8 1826 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 SPDYE2Q495Y8 402 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 FAM83BQ5T0W9 1011 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 CCDC84Q86UT8 332 aaPredicted RBP26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 HDAC9Q9UKV0 1011 aa26.41■■□□□ 1.82
NPLOC4-217ENST00000574897 UTRNP46939 3433 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 PVALEFA0A1B0GWK0 134 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 SHTN1A0MZ66 631 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 URI1O94763 535 aaPredicted RBP26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 TUBB4AP04350 444 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 FECHP22830 423 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 BTNL9Q6UXG8 535 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 DNAJC19Q96DA6 116 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 ERO1AQ96HE7 468 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 CYP3A7-CYP3A51PA0A087WV96 503 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 FAM86B1E9PN63 330 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 FAM86B2P0C5J1 330 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 CYP3A7P24462 503 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 CACNB1Q02641 598 aaPredicted RBP26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 AP3B2Q13367 1082 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 ELF2Q15723 593 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 CENPPQ6IPU0 288 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 MTERF4Q7Z6M4 381 aaKnown RBP26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 CCDC51Q96ER9 411 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 MBOAT7Q96N66 472 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 CHP1Q99653 195 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 ZBTB21Q9ULJ3 1066 aa26.4■■□□□ 1.82
NPLOC4-217ENST00000574897 NPHP3-ACAD11A0A0J9YXS1 232 aa26.39■■□□□ 1.82
NPLOC4-217ENST00000574897 MED24O75448 989 aa26.39■■□□□ 1.82
NPLOC4-217ENST00000574897 CYP2W1Q8TAV3 490 aa26.39■■□□□ 1.82
NPLOC4-217ENST00000574897 NOC3LQ8WTT2 800 aaKnown RBP26.39■■□□□ 1.82
NPLOC4-217ENST00000574897 ABL1P00519 1130 aa26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 MTIF2P46199 727 aaKnown RBP26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 EHHADHQ08426 723 aa26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 COBLL1Q53SF7 1204 aa26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 MIIPQ5JXC2 388 aa26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 SAMD1Q6SPF0 538 aaPredicted RBP26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 ETNPPLQ8TBG4 499 aa26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 TBC1D5Q92609 795 aa26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 LENG9Q96B70 501 aa26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 FGFBP2Q9BYJ0 223 aa26.39■■□□□ 1.81
NPLOC4-217ENST00000574897 GOLGA6L9A6NEM1 432 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 ERCC3P19447 782 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 RAD51AP2Q09MP3 1159 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 GLIS2Q9BZE0 524 aaPredicted RBP26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 ARHGEF10LQ9HCE6 1279 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 TBC1D7Q9P0N9 293 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 RASSF10A6NK89 507 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 SPDYE3A6NKU9 549 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 STAT2P52630 851 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 TRIM14Q14142 442 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 HYIQ5T013 277 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 NAP1L4Q99733 375 aaKnown RBP26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 TMX2Q9Y320 296 aa26.38■■□□□ 1.81
NPLOC4-217ENST00000574897 A0A1W2PQC6 194 aa26.37■■□□□ 1.81
NPLOC4-217ENST00000574897 POTEFA5A3E0 1075 aa26.37■■□□□ 1.81
NPLOC4-217ENST00000574897 POTEIP0CG38 1075 aa26.37■■□□□ 1.81
NPLOC4-217ENST00000574897 SPIRE1Q08AE8 756 aa26.37■■□□□ 1.81
NPLOC4-217ENST00000574897 COASYQ13057 564 aa26.37■■□□□ 1.81
NPLOC4-217ENST00000574897 POTEGQ6S5H5 508 aa26.37■■□□□ 1.81
NPLOC4-217ENST00000574897 POTEEQ6S8J3 1075 aa26.37■■□□□ 1.81
NPLOC4-217ENST00000574897 KIFC2Q96AC6 838 aa26.37■■□□□ 1.81
NPLOC4-217ENST00000574897 MMP14P50281 582 aa26.36■■□□□ 1.81
NPLOC4-217ENST00000574897 DNM2P50570 870 aa26.36■■□□□ 1.81
NPLOC4-217ENST00000574897 NBPF9Q3BBW0 867 aa26.36■■□□□ 1.81
NPLOC4-217ENST00000574897 CCDC174Q6PII3 467 aa26.36■■□□□ 1.81
NPLOC4-217ENST00000574897 SLC30A10Q6XR72 485 aa26.36■■□□□ 1.81
NPLOC4-217ENST00000574897 CASQ1P31415 396 aa26.36■■□□□ 1.81
NPLOC4-217ENST00000574897 SREBF1P36956 1147 aa26.36■■□□□ 1.81
NPLOC4-217ENST00000574897 CXCL9Q07325 125 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms