RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 KAT2BQ92831 832 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 SAMD11Q96NU1 681 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 CACNA1HO95180 2353 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 DCHS1Q96JQ0 3298 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 PTPDC1A2A3K4 754 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 TMEM221A6NGB7 291 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 M0R296 226 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 MBTPS2O43462 519 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 EDNRBP24530 442 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 CALML3P27482 149 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 DLX2Q07687 328 aaPredicted RBP12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 PDE4DQ08499 809 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 CLUL1Q15846 466 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 CTC1Q2NKJ3 1217 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 TRIM71Q2Q1W2 868 aaKnown RBP12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 ZNF618Q5T7W0 954 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 RPAINQ86UA6 219 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 MYOCDQ8IZQ8 938 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 AFG1LQ8WV93 481 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 WNT8BQ93098 351 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 OSBP2Q969R2 916 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 PBXIP1Q96AQ6 731 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 PRRX2Q99811 253 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 RANBP17Q9H2T7 1088 aaKnown RBP12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 HDAC6Q9UBN7 1215 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 GTF2IRD1Q9UHL9 959 aa12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 PTPRZ1P23471 2315 aaPredicted RBP12.38□□□□□ -0.43
CTDNEP1-202ENST00000570380 LGR5O75473 907 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 AMHP03971 560 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 MMP3P08254 477 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 TDO2P48775 406 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 CCDC62Q6P9F0 684 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 TRIM67Q6ZTA4 783 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 TMEM192Q8IY95 271 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 DBF4BQ8NFT6 615 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 CLEC4DQ8WXI8 215 aa12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 POP1Q99575 1024 aaKnown RBP12.37□□□□□ -0.43
CTDNEP1-202ENST00000570380 NCK2O43639 380 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 SLC16A2P36021 539 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 PDE4BQ07343 736 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 PTK7Q13308 1070 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 PKN1Q16512 942 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 TTBK2Q6IQ55 1244 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 RNF207Q6ZRF8 634 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 FBXO11Q86XK2 927 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 STX8Q9UNK0 236 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 MTMR7Q9Y216 660 aa12.36□□□□□ -0.43
CTDNEP1-202ENST00000570380 DMDP11532 3685 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 STXBP3O00186 592 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 GPAA1O43292 621 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 NMT2O60551 498 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 APPP05067 770 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 CASTP20810 708 aaKnown RBP12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 RPS6P62753 249 aaKnown RBP12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 ZNF200P98182 395 aaPredicted RBP12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 ARHGAP1Q07960 439 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 HYAL1Q12794 435 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 SMAD4Q13485 552 aaKnown RBP12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 SUGP1Q8IWZ8 645 aaKnown RBP12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 IFNL3Q8IZI9 196 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 FBXL6Q8N531 539 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 C7orf31Q8N865 590 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 DNERQ8NFT8 737 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 APPBP2Q92624 585 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 ALG1Q9BT22 464 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
CTDNEP1-202ENST00000570380 PATL2C9JE40 543 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 TBX10O75333 385 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 GH1P01241 217 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 GTF2F1P35269 517 aaKnown RBP eCLIP12.34□□□□□ -0.439e-10■□□□□ 11.3
CTDNEP1-202ENST00000570380 PSEN2P49810 448 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 ZXDAP98168 799 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 HIC1Q14526 733 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 LY6KQ17RY6 165 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 PLEKHG4Q58EX7 1191 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 BTNL9Q6UXG8 535 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 CHST3Q7LGC8 479 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 SIRT2Q8IXJ6 389 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 TOP1MTQ969P6 601 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 YME1L1Q96TA2 773 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 MPHOSPH6Q99547 160 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 MYH6P13533 1939 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 EMSYQ7Z589 1322 aa12.34□□□□□ -0.43
CTDNEP1-202ENST00000570380 RIF1Q5UIP0 2472 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 FAM186AA6NE01 2351 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 KIAA1671Q9BY89 1806 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 M0R2C6 588 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 HAS3O00219 553 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 UPP2O95045 317 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 GNAT2P19087 354 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 VCPP55072 806 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 KIAA0753Q2KHM9 967 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 CCDC96Q2M329 555 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 SYDE2Q5VT97 1194 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 OSBPL7Q9BZF2 842 aa12.33□□□□□ -0.44
CTDNEP1-202ENST00000570380 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms