RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 EVA1BQ9NVM1 165 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 TMEM51Q9NW97 253 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 TMEM260Q9NX78 707 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 DCAF16Q9NXF7 216 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 PRKAG3Q9UGI9 489 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 RRP7AQ9Y3A4 280 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 USP31Q70CQ4 1352 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 PLEKHH1Q9ULM0 1364 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 DDX60Q8IY21 1712 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 MRC1P22897 1456 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 A6NHS1 94 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 RASA4BC9J798 803 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 WASLO00401 505 aaPredicted RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 THAP12O43422 761 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 PTCD1O75127 700 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 USP17L7P0C7H9 530 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 KCNA3P22001 575 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 HOXC13P31276 330 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 NPTX2P47972 431 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 COPAP53621 1224 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 SESN3P58005 492 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 PURAQ00577 322 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 UBXN1Q04323 297 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 PLS1Q14651 629 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 CCDC85BQ15834 202 aaPredicted RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 MZT2BQ6NZ67 158 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 PDXDC2PQ6P474 469 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 RNF19BQ6ZMZ0 732 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 PLEKHM2Q8IWE5 1019 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 RIN3Q8TB24 985 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 SMCR8Q8TEV9 937 aaPredicted RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 JAKMIP2Q96AA8 810 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 CLMNQ96JQ2 1002 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 USB1Q9BQ65 265 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 KATNAL1Q9BW62 490 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 HAUS2Q9NVX0 235 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 ACTR10Q9NZ32 417 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 XPO7Q9UIA9 1087 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 WDR33Q9C0J8 1336 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 A6NJY4 79 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 AKR1B10O60218 316 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 TPPPO94811 219 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 TBC1D8O95759 1140 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 CCDC159P0C7I6 412 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 HSPA5P11021 654 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 ATF7P17544 494 aaPredicted RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 RDXP35241 583 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 LRMPQ12912 555 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 LAMC2Q13753 1193 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 DCTN1Q14203 1278 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 KIF22Q14807 665 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 WTAPQ15007 396 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 HAUS3Q68CZ6 603 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 CCDC149Q6ZUS6 474 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 PPFIBP1Q86W92 1011 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 LDHDQ86WU2 507 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 C7orf61Q8IZ16 206 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 C1orf216Q8TAB5 229 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 GABPB2Q8TAK5 448 aaPredicted RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 SNED1Q8TER0 1413 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 FAM81BQ96LP2 452 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 CCDC138Q96M89 665 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 GBP4Q96PP9 640 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 SAP130Q9H0E3 1048 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 RWDD1Q9H446 243 aaPredicted RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 IL21Q9HBE4 155 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 PAPOLBQ9NRJ5 636 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 CALCOCO1Q9P1Z2 691 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 CCDC39Q9UFE4 941 aa3.47□□□□□ -1.85
CHD9-216ENST00000565803 DDX20Q9UHI6 824 aaKnown RBP3.47□□□□□ -1.85
CHD9-216ENST00000565803 ZNF609O15014 1411 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 C19orf81C9J6K1 198 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 P4HA2O15460 535 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 SASH1O94885 1247 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 TRIM27P14373 513 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 KIF11P52732 1056 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 BPIFB3P59826 476 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 CCDC173Q0VFZ6 552 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 MINDY4Q4G0A6 757 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 EP400NLQ6ZTU2 488 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 KDELC2Q7Z4H8 507 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 ERC1Q8IUD2 1116 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 CCDC170Q8IYT3 715 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 FAM26EQ8N5C1 309 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 THAP3Q8WTV1 239 aaPredicted RBP3.46□□□□□ -1.85
CHD9-216ENST00000565803 USP7Q93009 1102 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 LTV1Q96GA3 475 aaPredicted RBP3.46□□□□□ -1.85
CHD9-216ENST00000565803 TRMT2BQ96GJ1 504 aaKnown RBP3.46□□□□□ -1.85
CHD9-216ENST00000565803 TBCBQ99426 244 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 SARGQ9BW04 601 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 ARFGAP3Q9NP61 516 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 STARD7Q9NQZ5 370 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 MTRRQ9UBK8 725 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 GTF3C4Q9UKN8 822 aa3.46□□□□□ -1.85
CHD9-216ENST00000565803 WASHC2AQ641Q2 1341 aa3.46□□□□□ -1.86
CHD9-216ENST00000565803 MAGEB6P1A0A0J9YX57 407 aa3.46□□□□□ -1.86
CHD9-216ENST00000565803 ESPNB1AK53 854 aa3.46□□□□□ -1.86
CHD9-216ENST00000565803 B2RBV5 119 aa3.46□□□□□ -1.86
CHD9-216ENST00000565803 KLF4O43474 513 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms