RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 POTEEQ6S8J3 1075 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 IRF2BP1Q8IU81 584 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 TC2NQ8N9U0 490 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 SRRTQ9BXP5 876 aaKnown RBP15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 RAB34Q9BZG1 259 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 VCPKMTQ9H867 229 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 KIAA1024Q9UPX6 916 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 COL2A1P02458 1487 aaPredicted RBP15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 ZNF541Q9H0D2 1346 aa15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 KIF13BQ9NQT8 1826 aa15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 CYP4A11Q02928 519 aa15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 MTF1Q14872 753 aa15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 NCAPH2Q6IBW4 605 aa15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 FAM83AQ86UY5 434 aa15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 CNOT7Q9UIV1 285 aaKnown RBP15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 HACL1Q9UJ83 578 aa15.77■□□□□ 0.11
CARMIL3-203ENST00000560349 INPP5BP32019 993 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 RBL2Q08999 1139 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 TBX2Q13207 712 aaPredicted RBP15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 TCP11X2Q5H9J9 407 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 RAD54LQ92698 747 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 DDX12PQ92771 950 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 TEPSINQ96N21 525 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 DESI2Q9BSY9 194 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 TMX1Q9H3N1 280 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 HOMER2Q9NSB8 354 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 ZSCAN20P17040 1043 aaPredicted RBP15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 KCNB1Q14721 858 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 NBPF12Q5TAG4 269 aaPredicted RBP15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 BTNL9Q6UXG8 535 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 DLK2Q6UY11 383 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 TMEM139Q8IV31 216 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 CPXCR1Q8N123 301 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 MTMR14Q8NCE2 650 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 LENG9Q96B70 501 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 PPP1R13BQ96KQ4 1090 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 AGBL1Q96MI9 1066 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 C7orf25Q9BPX7 421 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 PAXBP1Q9Y5B6 917 aa15.76■□□□□ 0.11
CARMIL3-203ENST00000560349 RNF225M0QZC1 329 aaPredicted RBP15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 PSMA7O14818 248 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 MED24O75448 989 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 TNIP1Q15025 636 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 ANKRD40Q6AI12 368 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 FGFBP2Q9BYJ0 223 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 KCNMB3Q9NPA1 279 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 FER1L6Q2WGJ9 1857 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 PHF20L1A8MW92 1017 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 CHMP2AO43633 222 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 GCFC2P16383 781 aaKnown RBP15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 ZNF76P36508 570 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 COPB1P53618 953 aaKnown RBP15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 ORC2Q13416 577 aaPredicted RBP15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 PDIA5Q14554 519 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 PTPN14Q15678 1187 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 CRYGNQ8WXF5 182 aa15.75■□□□□ 0.11
CARMIL3-203ENST00000560349 ASNSP08243 561 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 CASP14P31944 242 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 FXR1P51114 621 aaKnown RBP eCLIP15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 PSMC6P62333 389 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 PRKG1Q13976 671 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 TTI2Q6NXR4 508 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 TOGARAM2Q6ZUX3 1019 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 CSGALNACT2Q8N6G5 542 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 DUSP9Q99956 384 aaKnown RBP15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 DEFB129Q9H1M3 183 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 ZHX3Q9H4I2 956 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 AP3B2Q13367 1082 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 STIM1Q13586 685 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 FKBP1CQ5VVH2 108 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 CCDC112Q8NEF3 446 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 ETNPPLQ8TBG4 499 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 BAG1Q99933 345 aaPredicted RBP15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
CARMIL3-203ENST00000560349 SOWAHDA6NJG2 315 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 MSH4O15457 936 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 SREBF1P36956 1147 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 USP11P51784 963 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 AMPD3Q01432 767 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 SYCP1Q15431 976 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 NYAP1Q6ZVC0 841 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 GPIHBP1Q8IV16 184 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 ZKSCAN4Q969J2 545 aaPredicted RBP15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 BCAS3Q9H6U6 928 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 GYPCP04921 128 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 PTGER2P43116 358 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 UBXN1Q04323 297 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 KIF4BQ2VIQ3 1234 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 FILIP1LQ4L180 1135 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 LDHDQ86WU2 507 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 TRPM4Q8TD43 1214 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 TANGO6Q9C0B7 1094 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 VPS33BQ9H267 617 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 SEMA6BQ9H3T3 888 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
CARMIL3-203ENST00000560349 A0A0U1RQJ8 604 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms