RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CHAC2Q8WUX2 184 aa12.28□□□□□ -0.44
MARK3-213ENST00000558611 WDR89Q96FK6 387 aaPredicted RBP12.28□□□□□ -0.44
MARK3-213ENST00000558611 WNT10AQ9GZT5 417 aa12.28□□□□□ -0.44
MARK3-213ENST00000558611 GMPR2Q9P2T1 348 aaKnown RBP12.28□□□□□ -0.44
MARK3-213ENST00000558611 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
MARK3-213ENST00000558611 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
MARK3-213ENST00000558611 ADCY9O60503 1353 aa12.28□□□□□ -0.44
MARK3-213ENST00000558611 CHURC1-FNTBB4DL54 471 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 SLFN14P0C7P3 912 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 NAT2P11245 290 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 RAG1P15918 1043 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 AFF1P51825 1210 aaKnown RBP12.27□□□□□ -0.45
MARK3-213ENST00000558611 EXOSC9Q06265 439 aaKnown RBP12.27□□□□□ -0.45
MARK3-213ENST00000558611 SUZ12Q15022 739 aaKnown RBP12.27□□□□□ -0.45
MARK3-213ENST00000558611 STYK1Q6J9G0 422 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 C12orf40Q86WS4 652 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 THNSL2Q86YJ6 484 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 ZNF622Q969S3 477 aaKnown RBP eCLIP12.27□□□□□ -0.45
MARK3-213ENST00000558611 ACSF2Q96CM8 615 aaPredicted RBP12.27□□□□□ -0.45
MARK3-213ENST00000558611 MASTLQ96GX5 879 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 PCDHGC5Q9Y5F6 944 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 LRRC37AA6NMS7 1700 aa12.27□□□□□ -0.45
MARK3-213ENST00000558611 NPR1P16066 1061 aa12.26□□□□□ -0.45
MARK3-213ENST00000558611 STAT3P40763 770 aa12.26□□□□□ -0.45
MARK3-213ENST00000558611 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.45
MARK3-213ENST00000558611 ARHGAP27Q6ZUM4 889 aa12.26□□□□□ -0.45
MARK3-213ENST00000558611 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
MARK3-213ENST00000558611 SLFN12Q8IYM2 578 aa12.26□□□□□ -0.45
MARK3-213ENST00000558611 KLHDC7BQ96G42 594 aa12.26□□□□□ -0.45
MARK3-213ENST00000558611 DHRS1Q96LJ7 313 aa12.26□□□□□ -0.45
MARK3-213ENST00000558611 UTP14AQ9BVJ6 771 aaKnown RBP12.26□□□□□ -0.45
MARK3-213ENST00000558611 ATP8A1Q9Y2Q0 1164 aa12.26□□□□□ -0.45
MARK3-213ENST00000558611 VAMP4O75379 141 aa12.25□□□□□ -0.45
MARK3-213ENST00000558611 DDX58O95786 925 aaKnown RBP12.25□□□□□ -0.45
MARK3-213ENST00000558611 SNRPBP14678 240 aaKnown RBP12.25□□□□□ -0.45
MARK3-213ENST00000558611 CNGA1P29973 690 aa12.25□□□□□ -0.45
MARK3-213ENST00000558611 YARSP54577 528 aaKnown RBP12.25□□□□□ -0.45
MARK3-213ENST00000558611 ERVK-24P63145 666 aa12.25□□□□□ -0.45
MARK3-213ENST00000558611 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
MARK3-213ENST00000558611 SLCO4C1Q6ZQN7 724 aa12.25□□□□□ -0.45
MARK3-213ENST00000558611 MCATQ8IVS2 390 aaKnown RBP12.25□□□□□ -0.45
MARK3-213ENST00000558611 KISS1RQ969F8 398 aaPredicted RBP12.25□□□□□ -0.45
MARK3-213ENST00000558611 KIF2CQ99661 725 aa12.25□□□□□ -0.45
MARK3-213ENST00000558611 ISCA1Q9BUE6 129 aa12.25□□□□□ -0.45
MARK3-213ENST00000558611 CAAP1Q9H8G2 361 aa12.25□□□□□ -0.45
MARK3-213ENST00000558611 GDF2Q9UK05 429 aaPredicted RBP12.25□□□□□ -0.45
MARK3-213ENST00000558611 FAM86C2PA6NEL3 165 aa12.24□□□□□ -0.45
MARK3-213ENST00000558611 TCERG1O14776 1098 aaKnown RBP12.24□□□□□ -0.45
MARK3-213ENST00000558611 TM4SF5O14894 197 aa12.24□□□□□ -0.45
MARK3-213ENST00000558611 MYCLP1P12525 358 aaPredicted RBP12.24□□□□□ -0.45
MARK3-213ENST00000558611 PMS1P54277 932 aaKnown RBP12.24□□□□□ -0.45
MARK3-213ENST00000558611 ETF1P62495 437 aaKnown RBP12.24□□□□□ -0.45
MARK3-213ENST00000558611 C21orf62-AS1Q17RA5 79 aa12.24□□□□□ -0.45
MARK3-213ENST00000558611 FNDC3BQ53EP0 1204 aaKnown RBP12.24□□□□□ -0.45
MARK3-213ENST00000558611 WFDC8Q8IUA0 241 aa12.24□□□□□ -0.45
MARK3-213ENST00000558611 MAP4K3Q8IVH8 894 aa12.24□□□□□ -0.45
MARK3-213ENST00000558611 DHX37Q8IY37 1157 aaKnown RBP12.24□□□□□ -0.45
MARK3-213ENST00000558611 PRPF38AQ8NAV1 312 aaKnown RBP12.24□□□□□ -0.45
MARK3-213ENST00000558611 WDR18Q9BV38 432 aa12.24□□□□□ -0.45
MARK3-213ENST00000558611 NCOA5Q9HCD5 579 aaKnown RBP12.24□□□□□ -0.45
MARK3-213ENST00000558611 HIF3AQ9Y2N7 669 aa12.24□□□□□ -0.45
MARK3-213ENST00000558611 SH3TC1Q8TE82 1336 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 LOC100289279A0A1B0GTE1 492 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 PLD2O14939 933 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 FANCGO15287 622 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 LILRB5O75023 590 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 ALBP02768 609 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 TRIM28Q13263 835 aaKnown RBP12.23□□□□□ -0.45
MARK3-213ENST00000558611 SLC10A5Q5PT55 438 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 FAM13CQ8NE31 585 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 CEP89Q96ST8 783 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 USP26Q9BXU7 913 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 TRMT112Q9UI30 125 aaKnown RBP12.23□□□□□ -0.45
MARK3-213ENST00000558611 G3BP2Q9UN86 482 aaKnown RBP12.23□□□□□ -0.45
MARK3-213ENST00000558611 CSADQ9Y600 493 aa12.23□□□□□ -0.45
MARK3-213ENST00000558611 A0A087X0B3 334 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 AOC2O75106 756 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 SOX5P35711 763 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 RASSF7Q02833 373 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 G2E3Q7L622 706 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 RPGRQ92834 1020 aaKnown RBP12.22□□□□□ -0.45
MARK3-213ENST00000558611 MYD88Q99836 296 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 DHRS4Q9BTZ2 278 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 METTL22Q9BUU2 404 aaPredicted RBP12.22□□□□□ -0.45
MARK3-213ENST00000558611 SUCOQ9UBS9 1254 aaKnown RBP12.22□□□□□ -0.45
MARK3-213ENST00000558611 TJP2Q9UDY2 1190 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 MAP3K2Q9Y2U5 619 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 A0A1B0GUL6 1792 aa12.22□□□□□ -0.45
MARK3-213ENST00000558611 LTBP1Q14766 1721 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 A0A1W2PQU0 124 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 PI4KAP2A4QPH2 592 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 ANKRD34BA5PLL1 514 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 IRS4O14654 1257 aaPredicted RBP12.21□□□□□ -0.45
MARK3-213ENST00000558611 RGS13O14921 159 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 POU3F3P20264 500 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms