RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 PPP2R5DQ14738 602 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 KLHDC4Q8TBB5 520 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 ANO3Q9BYT9 981 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 HYOU1Q9Y4L1 999 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 TROVE2P10155 538 aaKnown RBP eCLIP13.03□□□□□ -0.32
NEK9-210ENST00000557026 PHKA1P46020 1223 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 RPS6KA2Q15349 733 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 RNF207Q6ZRF8 634 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
NEK9-210ENST00000557026 NLRP7Q8WX94 980 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 SPATA31E1Q6ZUB1 1445 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
NEK9-210ENST00000557026 COL15A1P39059 1388 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 H7C1W4 665 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 WDR46O15213 610 aaKnown RBP13.03□□□□□ -0.32
NEK9-210ENST00000557026 IFNAR1P17181 557 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 SH3BGRP55822 239 aaPredicted RBP13.03□□□□□ -0.32
NEK9-210ENST00000557026 UAP1Q16222 522 aaPredicted RBP13.03□□□□□ -0.32
NEK9-210ENST00000557026 FAM20AQ96MK3 541 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 MYO1AQ9UBC5 1043 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 USP31Q70CQ4 1352 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 ECE1P42892 770 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 MB21D1Q8N884 522 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 PHKBQ93100 1093 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 HVCN1Q96D96 273 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 FRMPD2Q68DX3 1309 aaPredicted RBP13.03□□□□□ -0.32
NEK9-210ENST00000557026 KCNJ18B7U540 433 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 TECP42680 631 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 SREBF2Q12772 1141 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 DRP2Q13474 957 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 KCNJ12Q14500 433 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 SPZ1Q9BXG8 430 aa13.03□□□□□ -0.32
NEK9-210ENST00000557026 CLRN2A0PK11 232 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 CARNS1A5YM72 827 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 MORC3Q14149 939 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 EXOC3L4Q17RC7 722 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 TEX2Q8IWB9 1127 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 SIX6OS1Q8N1H7 587 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 PIGBQ92521 554 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 MAP4K1Q92918 833 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L15C9J2P7 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L10C9JJH3 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L11C9JVI0 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L18D6R9N7 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L22D6RA61 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L19D6RCP7 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L20D6RJB6 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 MYO1FO00160 1098 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 NNMTP40261 264 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 RECQLP46063 649 aaPredicted RBP13.02□□□□□ -0.32
NEK9-210ENST00000557026 MNAT1P51948 309 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 FKBP3Q00688 224 aaKnown RBP13.02□□□□□ -0.32
NEK9-210ENST00000557026 TSPY1Q01534 308 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 USP17L24Q0WX57 530 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.32
NEK9-210ENST00000557026 C8orf34Q49A92 452 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 DDX17Q92841 729 aaKnown RBP13.02□□□□□ -0.32
NEK9-210ENST00000557026 PPANQ9NQ55 473 aaKnown RBP13.02□□□□□ -0.32
NEK9-210ENST00000557026 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.32
NEK9-210ENST00000557026 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.32
NEK9-210ENST00000557026 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
NEK9-210ENST00000557026 SART1O43290 800 aaKnown RBP13.02□□□□□ -0.33
NEK9-210ENST00000557026 RPN1P04843 607 aaKnown RBP13.02□□□□□ -0.33
NEK9-210ENST00000557026 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 PHLDB2Q86SQ0 1253 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 DHX38Q92620 1227 aaKnown RBP13.02□□□□□ -0.33
NEK9-210ENST00000557026 KRT12Q99456 494 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 VCX3AQ9NNX9 186 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 SEL1LQ9UBV2 794 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 KIF28PB7ZC32 967 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 DPYSL4O14531 572 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 RNF40O75150 1001 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 IGBP1P78318 339 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 BFSP1Q12934 665 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 RRAGAQ7L523 313 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 FBXO18Q8NFZ0 1043 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 U2AF1L4Q8WU68 220 aaKnown RBP13.02□□□□□ -0.33
NEK9-210ENST00000557026 PARK7Q99497 189 aaKnown RBP13.02□□□□□ -0.33
NEK9-210ENST00000557026 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 PASKQ96RG2 1323 aa13.02□□□□□ -0.33
NEK9-210ENST00000557026 TTI1O43156 1089 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 DENND2CQ68D51 928 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 KRBA2Q6ZNG9 492 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 CAPZA3Q96KX2 299 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 PARVGQ9HBI0 331 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 TAB2Q9NYJ8 693 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 JRKLQ9Y4A0 524 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 SCINQ9Y6U3 715 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 ABL1P00519 1130 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 CRKP46108 304 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 ARHGAP44Q17R89 818 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
NEK9-210ENST00000557026 NUF2Q9BZD4 464 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms