RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SNRNP48Q6IEG0 339 aaKnown RBP6.23□□□□□ -1.41
CKAP4-203ENST00000553039 FAM117BQ6P1L5 589 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 KIAA1211Q6ZU35 1233 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 PACS2Q86VP3 889 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 UBALD2Q8IYN6 164 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 KIAA2013Q8IYS2 634 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 GPR161Q8N6U8 529 aaKnown RBP6.23□□□□□ -1.41
CKAP4-203ENST00000553039 CCDC17Q96LX7 622 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 HAUS7Q99871 368 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 PHF7Q9BWX1 381 aaPredicted RBP6.23□□□□□ -1.41
CKAP4-203ENST00000553039 COPRSQ9NQ92 184 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 DLL3Q9NYJ7 618 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 ZMIZ1Q9ULJ6 1067 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 RWDD3Q9Y3V2 267 aa6.23□□□□□ -1.41
CKAP4-203ENST00000553039 ADCY6O43306 1168 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 MYL3P08590 195 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 ARID4AP29374 1257 aaPredicted RBP6.22□□□□□ -1.41
CKAP4-203ENST00000553039 SHMT1P34896 483 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 NDUFV1P49821 464 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 DEFB103AP81534 67 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 PTGISQ16647 500 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 TMEM164Q5U3C3 297 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 TMCO2Q7Z6W1 182 aaPredicted RBP6.22□□□□□ -1.41
CKAP4-203ENST00000553039 PLEKHM2Q8IWE5 1019 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 WDR63Q8IWG1 891 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 CPXCR1Q8N123 301 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 EPS8L1Q8TE68 723 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 BORCS6Q96GS4 357 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 RPGRIP1Q96KN7 1286 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 YME1L1Q96TA2 773 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 HINFPQ9BQA5 517 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 SLF1Q9BQI6 1058 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 C11orf84Q9BUA3 381 aaPredicted RBP6.22□□□□□ -1.41
CKAP4-203ENST00000553039 KANSL2Q9H9L4 492 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 ZSWIM6Q9HCJ5 1215 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 SH2B1Q9NRF2 756 aaPredicted RBP6.22□□□□□ -1.41
CKAP4-203ENST00000553039 KIAA1522Q9P206 1035 aaPredicted RBP6.22□□□□□ -1.41
CKAP4-203ENST00000553039 SWAP70Q9UH65 585 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 ZNF214Q9UL59 606 aaPredicted RBP6.22□□□□□ -1.41
CKAP4-203ENST00000553039 RAD50Q92878 1312 aa6.22□□□□□ -1.41
CKAP4-203ENST00000553039 MYH2Q9UKX2 1941 aa6.21□□□□□ -1.41
CKAP4-203ENST00000553039 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 CXCL10P02778 98 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 UBTFL1P0CB47 393 aaPredicted RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 ATF7P17544 494 aaPredicted RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 BMPR1AP36894 532 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 PLCD1P51178 756 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 DYNLL1P63167 89 aaKnown RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 HTRA4P83105 476 aaPredicted RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 PURAQ00577 322 aaKnown RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 ICA1Q05084 483 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 DLX2Q07687 328 aaPredicted RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 TFCP2Q12800 502 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 COASYQ13057 564 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 PTPN21Q16825 1174 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 DUSP28Q4G0W2 176 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 KIAA1755Q5JYT7 1200 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 FBXO11Q86XK2 927 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 SP7Q8TDD2 431 aaPredicted RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 RUBCNQ92622 972 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 KATNBL1Q9H079 304 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 MFSD1Q9H3U5 465 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 SMC4Q9NTJ3 1288 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.21□□□□□ -1.42
CKAP4-203ENST00000553039 CHD7Q9P2D1 2997 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 A0A0G2JMZ2 1700 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 ASTN1O14525 1302 aa6.21□□□□□ -1.42
CKAP4-203ENST00000553039 PRR5-ARHGAP8B1AHC4 643 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 NKRFO15226 690 aaKnown RBP eCLIP6.2□□□□□ -1.42
CKAP4-203ENST00000553039 NUDT7P0C024 238 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 OAZ1P54368 228 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 RRP1P56182 461 aaKnown RBP6.2□□□□□ -1.42
CKAP4-203ENST00000553039 ARHGAP8P85298 464 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 GABPAQ06546 454 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 HYAL1Q12794 435 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 NR1H3Q13133 447 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 G3BP1Q13283 466 aaKnown RBP eCLIP6.2□□□□□ -1.426e-9■□□□□ 8.4
CKAP4-203ENST00000553039 RSPO4Q2I0M5 234 aaPredicted RBP6.2□□□□□ -1.42
CKAP4-203ENST00000553039 TTC39AQ5SRH9 613 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 TAPT1Q6NXT6 567 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 LRRC8DQ7L1W4 858 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 SIAH1Q8IUQ4 282 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 MYOCDQ8IZQ8 938 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 FIBCD1Q8N539 461 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 REPS2Q8NFH8 660 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 TOP1MTQ969P6 601 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 IL17RAQ96F46 866 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 WDR11Q9BZH6 1224 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 VTA1Q9NP79 307 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 FBXO28Q9NVF7 368 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 MCM9Q9NXL9 1143 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 RIPK3Q9Y572 518 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 PCDHGC5Q9Y5F6 944 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 PTPRCP08575 1304 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 EMSYQ7Z589 1322 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 ZNF236Q9UL36 1845 aa6.2□□□□□ -1.42
CKAP4-203ENST00000553039 WDFY4Q6ZS81 3184 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 FSD2A1L4K1 749 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 B4DLN1 442 aa6.19□□□□□ -1.42
CKAP4-203ENST00000553039 C5orf67F2Z3F1 127 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms