RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 UNC13DQ70J99 1090 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 LRRC15Q8TF66 581 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 NUDT12Q9BQG2 462 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 SGIP1Q9BQI5 828 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 INTS13Q9NVM9 706 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 KIAA1024Q9UPX6 916 aa17.35■□□□□ 0.37
SCN8A-206ENST00000550891 LDHDQ86WU2 507 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 CSGALNACT2Q8N6G5 542 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 PRPF38AQ8NAV1 312 aaKnown RBP17.34■□□□□ 0.37
SCN8A-206ENST00000550891 NLGN2Q8NFZ4 835 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 NOC3LQ8WTT2 800 aaKnown RBP17.34■□□□□ 0.37
SCN8A-206ENST00000550891 PGAP2Q9UHJ9 254 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 CCP110O43303 1012 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 TNNT1P13805 278 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 Q4G0T1 1027 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 APOBEC3FQ8IUX4 373 aaKnown RBP17.34■□□□□ 0.37
SCN8A-206ENST00000550891 TEPSINQ96N21 525 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 SLF1Q9BQI6 1058 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 VPS16Q9H269 839 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 PICK1Q9NRD5 415 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 ADD3Q9UEY8 706 aaKnown RBP17.34■□□□□ 0.37
SCN8A-206ENST00000550891 TRIM49BA6NDI0 452 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 MYMKA6NI61 221 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 PHF20L1A8MW92 1017 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 TERF1P54274 439 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 KRT31Q15323 416 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 PTPN14Q15678 1187 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 TCP11X2Q5H9J9 407 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 FAM114A1Q8IWE2 563 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 DDX12PQ92771 950 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 PRIMPOLQ96LW4 560 aa17.34■□□□□ 0.37
SCN8A-206ENST00000550891 SRRTQ9BXP5 876 aaKnown RBP17.34■□□□□ 0.37
SCN8A-206ENST00000550891 MYH7BA7E2Y1 1941 aa17.33■□□□□ 0.37
SCN8A-206ENST00000550891 SLC26A4O43511 780 aa17.33■□□□□ 0.37
SCN8A-206ENST00000550891 P2RX5Q93086 422 aa17.33■□□□□ 0.37
SCN8A-206ENST00000550891 MBOAT7Q96N66 472 aa17.33■□□□□ 0.37
SCN8A-206ENST00000550891 SLC39A2Q9NP94 309 aa17.33■□□□□ 0.37
SCN8A-206ENST00000550891 TAB2Q9NYJ8 693 aa17.33■□□□□ 0.37
SCN8A-206ENST00000550891 USP14P54578 494 aa17.33■□□□□ 0.36
SCN8A-206ENST00000550891 STK4Q13043 487 aa17.33■□□□□ 0.36
SCN8A-206ENST00000550891 CPXCR1Q8N123 301 aa17.33■□□□□ 0.36
SCN8A-206ENST00000550891 KIAA1683Q9H0B3 1180 aa17.33■□□□□ 0.36
SCN8A-206ENST00000550891 ASTN2O75129 1339 aaPredicted RBP17.33■□□□□ 0.36
SCN8A-206ENST00000550891 FLOT1O75955 427 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 CCNE1P24864 410 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 NBPF12Q5TAG4 269 aaPredicted RBP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 ANGEL2Q5VTE6 544 aaKnown RBP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 ZNF592Q92610 1267 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 THAP9Q9H5L6 903 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 AS3MTQ9HBK9 375 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 LIMA1Q9UHB6 759 aaKnown RBP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 POTEB3A0JP26 581 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 POTECB2RU33 542 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 FAM86B1E9PN63 330 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 OPLAHO14841 1288 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 FAM86B2P0C5J1 330 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 FCER1AP12319 257 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 CIITAP33076 1130 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 STAT3P40763 770 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 PTGER2P43116 358 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 COPB1P53618 953 aaKnown RBP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 POTEBQ6S5H4 581 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 ZNF541Q9H0D2 1346 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 AKR1B15C9JRZ8 316 aaPredicted RBP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 TEX33O43247 280 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 EEF1GP26641 437 aaKnown RBP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 CCAR2Q8N163 923 aaKnown RBP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 CPLX3Q8WVH0 158 aa17.32■□□□□ 0.36
SCN8A-206ENST00000550891 BAG1Q99933 345 aaPredicted RBP17.32■□□□□ 0.36
SCN8A-206ENST00000550891 CYP3A4P08684 503 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 HOXA7P31268 230 aaPredicted RBP17.31■□□□□ 0.36
SCN8A-206ENST00000550891 CCDC65Q8IXS2 484 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 ETNPPLQ8TBG4 499 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 WRNIP1Q96S55 665 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 P2RX7Q99572 595 aaKnown RBP17.31■□□□□ 0.36
SCN8A-206ENST00000550891 DNM3Q9UQ16 869 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
SCN8A-206ENST00000550891 ICAM1P05362 532 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 PRKCSHP14314 528 aaPredicted RBP17.31■□□□□ 0.36
SCN8A-206ENST00000550891 INPP5BP32019 993 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 ADKP55263 362 aaKnown RBP17.31■□□□□ 0.36
SCN8A-206ENST00000550891 PSMD2Q13200 908 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 MTMR2Q13614 643 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 KCNK18Q7Z418 384 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 CRYGNQ8WXF5 182 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 ZHX3Q9H4I2 956 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 UBXN1Q04323 297 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 GOLGA8FQ08AF8 430 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 GOLGA8DPQ0D2H9 430 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 GPBP1Q86WP2 473 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 MCF2L2Q86YR7 1114 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 TBC1D5Q92609 795 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 TSG101Q99816 390 aa17.31■□□□□ 0.36
SCN8A-206ENST00000550891 UQCRHLA0A096LP55 91 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 E9PMD0 336 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 MSH4O15457 936 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 ARHGAP6O43182 974 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms