RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 ADAT2Q7Z6V5 191 aaKnown RBP6.01□□□□□ -1.45
VPS29-205ENST00000548539 MENTQ9BUN1 341 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 MRIQ9BWK5 157 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 SPATA9Q9BWV2 254 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 GFOD1Q9NXC2 390 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 APEX2Q9UBZ4 518 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 DBR1Q9UK59 544 aaKnown RBP6.01□□□□□ -1.45
VPS29-205ENST00000548539 FBXL21Q9UKT6 434 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 ZNF451Q9Y4E5 1061 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 PTCH2Q9Y6C5 1203 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 SBNO2Q9Y2G9 1366 aa6.01□□□□□ -1.45
VPS29-205ENST00000548539 ANKRD34BA5PLL1 514 aa6□□□□□ -1.45
VPS29-205ENST00000548539 F8W031 263 aaPredicted RBP6□□□□□ -1.45
VPS29-205ENST00000548539 ENPP3O14638 875 aa6□□□□□ -1.45
VPS29-205ENST00000548539 FAM153BP0C7A2 387 aa6□□□□□ -1.45
VPS29-205ENST00000548539 CHST13Q8NET6 341 aa6□□□□□ -1.45
VPS29-205ENST00000548539 ADCY4Q8NFM4 1077 aa6□□□□□ -1.45
VPS29-205ENST00000548539 THAP3Q8WTV1 239 aaPredicted RBP6□□□□□ -1.45
VPS29-205ENST00000548539 APPBP2Q92624 585 aa6□□□□□ -1.45
VPS29-205ENST00000548539 SMARCC1Q92922 1105 aaPredicted RBP6□□□□□ -1.45
VPS29-205ENST00000548539 APBA2Q99767 749 aa6□□□□□ -1.45
VPS29-205ENST00000548539 LRP2BPQ9P2M1 347 aa6□□□□□ -1.45
VPS29-205ENST00000548539 SUGT1Q9Y2Z0 365 aa6□□□□□ -1.45
VPS29-205ENST00000548539 SHOXO15266 292 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 CLSTN1O94985 981 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 TACR2P21452 398 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 MC3RP41968 323 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 SARSP49591 514 aaKnown RBP5.99□□□□□ -1.45
VPS29-205ENST00000548539 CRTC3Q6UUV7 619 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 HOMER1Q86YM7 354 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 C7orf61Q8IZ16 206 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 KLHL25Q9H0H3 589 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 PDLIM7Q9NR12 457 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 PCDHB12Q9Y5F1 795 aa5.99□□□□□ -1.45
VPS29-205ENST00000548539 A0A1W2PQU0 124 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 AGRPO00253 132 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 PLATP00750 562 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 ASGR2P07307 311 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 NAT2P11245 290 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 CD247P20963 164 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 AUHQ13825 339 aaKnown RBP5.98□□□□□ -1.45
VPS29-205ENST00000548539 B3GNT8Q7Z7M8 397 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 LRRC47Q8N1G4 583 aaKnown RBP5.98□□□□□ -1.45
VPS29-205ENST00000548539 BRF1Q92994 677 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 GBP3Q9H0R5 595 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 EPN3Q9H201 632 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 TMEM260Q9NX78 707 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 NTMQ9P121 344 aa5.98□□□□□ -1.45
VPS29-205ENST00000548539 IQCA1LA6NCM1 817 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 CYR61O00622 381 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 TBX1O43435 398 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 ADCY3O60266 1144 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 ASMTLO95671 621 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 GSNP06396 782 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 ITGAVP06756 1048 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 GSTM1P09488 218 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 ZNF143P52747 638 aaPredicted RBP5.97□□□□□ -1.45
VPS29-205ENST00000548539 PPP2R5DQ14738 602 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 TKFCQ3LXA3 575 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 RTP2Q5QGT7 225 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 YOD1Q5VVQ6 348 aaPredicted RBP5.97□□□□□ -1.45
VPS29-205ENST00000548539 ZNF761Q86XN6 746 aaPredicted RBP5.97□□□□□ -1.45
VPS29-205ENST00000548539 ZFPM1Q8IX07 1006 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 ALG3Q92685 438 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 DVL3Q92997 716 aaPredicted RBP5.97□□□□□ -1.45
VPS29-205ENST00000548539 ZNF669Q96BR6 464 aaPredicted RBP5.97□□□□□ -1.45
VPS29-205ENST00000548539 PUS7Q96PZ0 661 aaKnown RBP5.97□□□□□ -1.45
VPS29-205ENST00000548539 SLITRK6Q9H5Y7 841 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 GP6Q9HCN6 339 aa5.97□□□□□ -1.45
VPS29-205ENST00000548539 PPM1BO75688 479 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 SLPIP03973 132 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 ITGA4P13612 1032 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 L1CAMP32004 1257 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 ZNF445P59923 1031 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 PPP2R2AP63151 447 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 TBC1D10BQ4KMP7 808 aaPredicted RBP5.96□□□□□ -1.46
VPS29-205ENST00000548539 PLEKHG4Q58EX7 1191 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 NOL9Q5SY16 702 aaKnown RBP5.96□□□□□ -1.46
VPS29-205ENST00000548539 FOXB2Q5VYV0 432 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 TTLL7Q6ZT98 887 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 ZNF227Q86WZ6 799 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 ZNF513Q8N8E2 541 aaPredicted RBP5.96□□□□□ -1.46
VPS29-205ENST00000548539 JMYQ8N9B5 988 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 ZBTB38Q8NAP3 1195 aaPredicted RBP5.96□□□□□ -1.46
VPS29-205ENST00000548539 ZSWIM2Q8NEG5 633 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 SH3RF3Q8TEJ3 882 aaPredicted RBP5.96□□□□□ -1.46
VPS29-205ENST00000548539 DSCC1Q9BVC3 393 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 NOL6Q9H6R4 1146 aaKnown RBP5.96□□□□□ -1.46
VPS29-205ENST00000548539 ARHGEF4Q9NR80 690 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 WHRNQ9P202 907 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 AKT3Q9Y243 479 aa5.96□□□□□ -1.46
VPS29-205ENST00000548539 PPP1R12AO14974 1030 aaPredicted RBP5.95□□□□□ -1.46
VPS29-205ENST00000548539 TACR1P25103 407 aa5.95□□□□□ -1.46
VPS29-205ENST00000548539 GRIA2P42262 883 aa5.95□□□□□ -1.46
VPS29-205ENST00000548539 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
VPS29-205ENST00000548539 CWF19L1Q69YN2 538 aaKnown RBP5.95□□□□□ -1.46
VPS29-205ENST00000548539 C16orf86Q6ZW13 317 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms