RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MRFAP1L1Q96HT8 127 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 TRIM9Q9C026 710 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 KCNMB3Q9NPA1 279 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 SYNRGQ9UMZ2 1314 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 MED24O75448 989 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 CCT6AP40227 531 aaKnown RBP15.37■□□□□ 0.05
HCFC2-202ENST00000544223 CALML4Q96GE6 196 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 AK8Q96MA6 479 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 KIAA1683Q9H0B3 1180 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 SLC39A2Q9NP94 309 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 TBC1D7Q9P0N9 293 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 GCOM1H8Y6P7 765 aaPredicted RBP15.36■□□□□ 0.05
HCFC2-202ENST00000544223 DDX39AO00148 427 aaKnown RBP15.36■□□□□ 0.05
HCFC2-202ENST00000544223 POLR2MP0CAP2 368 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 SREBF1P36956 1147 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 KRT79Q5XKE5 535 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 APOBEC3FQ8IUX4 373 aaKnown RBP15.36■□□□□ 0.05
HCFC2-202ENST00000544223 PRPF38AQ8NAV1 312 aaKnown RBP15.36■□□□□ 0.05
HCFC2-202ENST00000544223 RGL1Q9NZL6 768 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 EML1O00423 815 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 TEX33O43247 280 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 USP2O75604 605 aaPredicted RBP15.36■□□□□ 0.05
HCFC2-202ENST00000544223 IDEP14735 1019 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 CLCN1P35523 988 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 BACE1P56817 501 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 ZNF280CQ8ND82 737 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 NELFBQ8WX92 580 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 CLMNQ96JQ2 1002 aa15.36■□□□□ 0.05
HCFC2-202ENST00000544223 ARP10275 920 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 USP11P51784 963 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 PDE4DQ08499 809 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 AP3B2Q13367 1082 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 LRRC41Q15345 812 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 DCAF15Q66K64 600 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 TRIML1Q8N9V2 468 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 CLEC4DQ8WXI8 215 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 LARP4BQ92615 738 aaKnown RBP15.35■□□□□ 0.05
HCFC2-202ENST00000544223 CCDC34Q96HJ3 373 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 FGFBP2Q9BYJ0 223 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 WDR46O15213 610 aaKnown RBP15.35■□□□□ 0.05
HCFC2-202ENST00000544223 ICAM1P05362 532 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 MMP14P50281 582 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 SPIRE1Q08AE8 756 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 VGLL4Q14135 290 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
HCFC2-202ENST00000544223 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.35■□□□□ 0.05
HCFC2-202ENST00000544223 ENOX1Q8TC92 643 aaKnown RBP15.35■□□□□ 0.05
HCFC2-202ENST00000544223 DOCK1Q14185 1865 aa15.35■□□□□ 0.05
HCFC2-202ENST00000544223 CEP350Q5VT06 3117 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 COL11A1P12107 1806 aaPredicted RBP15.34■□□□□ 0.05
HCFC2-202ENST00000544223 IGLV3-22A0A075B6J6 115 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 ZNF18P17022 549 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 TPM4P67936 248 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 ZNF658Q5TYW1 1059 aaPredicted RBP15.34■□□□□ 0.05
HCFC2-202ENST00000544223 NSMFQ6X4W1 530 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 FAM160B2Q86V87 743 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 ZNF112Q9UJU3 913 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 SORBS3O60504 671 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 EIF2AK2P19525 551 aaKnown RBP15.34■□□□□ 0.05
HCFC2-202ENST00000544223 PLS1Q14651 629 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 ARMCX5Q6P1M9 558 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 CATSPER3Q86XQ3 398 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 SLC38A10Q9HBR0 1119 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 PPP1R9AQ9ULJ8 1098 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 SYNPO2Q9UMS6 1093 aa15.34■□□□□ 0.05
HCFC2-202ENST00000544223 CYP3A7-CYP3A51PA0A087WV96 503 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 CYP3A7P24462 503 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 PDIA5Q14554 519 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 GPR162Q16538 588 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 TREML2Q5T2D2 321 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 SV2BQ7L1I2 683 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 LRRC8AQ8IWT6 810 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 RAD54LQ92698 747 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 DDX12PQ92771 950 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 WDR11Q9BZH6 1224 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 MRPL11Q9Y3B7 192 aaKnown RBP15.33■□□□□ 0.04
HCFC2-202ENST00000544223 GOLGA6L6A8MZA4 724 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 PIK3CDO00329 1044 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 VWA5AO00534 786 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 GCFC2P16383 781 aaKnown RBP15.33■□□□□ 0.04
HCFC2-202ENST00000544223 PABPC4Q13310 644 aaKnown RBP eCLIP15.33■□□□□ 0.04
HCFC2-202ENST00000544223 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.04
HCFC2-202ENST00000544223 TPD52L1Q16890 204 aaPredicted RBP15.33■□□□□ 0.04
HCFC2-202ENST00000544223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.33■□□□□ 0.04
HCFC2-202ENST00000544223 KIAA0895Q8NCT3 520 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 PIGOQ8TEQ8 1089 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 TAAR1Q96RJ0 339 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 SH2D3AQ9BRG2 576 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 R3HDMLQ9H3Y0 253 aa15.33■□□□□ 0.04
HCFC2-202ENST00000544223 ADARB2Q9NS39 739 aaKnown RBP15.33■□□□□ 0.04
HCFC2-202ENST00000544223 PHIPQ8WWQ0 1821 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 RPS6P62753 249 aaKnown RBP15.32■□□□□ 0.04
HCFC2-202ENST00000544223 PAK1Q13153 545 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 LPAR1Q92633 364 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 DCPSQ96C86 337 aaKnown RBP15.32■□□□□ 0.04
HCFC2-202ENST00000544223 MBOAT7Q96N66 472 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 RAB34Q9BZG1 259 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 GLT8D2Q9H1C3 349 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms