RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 OR2W6PQ8NHA6 318 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 USP7Q93009 1102 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 TSR2Q969E8 191 aaKnown RBP4.07□□□□□ -1.76
CD44-234ENST00000531873 MTMR8Q96EF0 704 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 WNK4Q96J92 1243 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 TTC1Q99614 292 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 CELF4Q9BZC1 486 aaKnown RBP4.07□□□□□ -1.76
CD44-234ENST00000531873 CCDC8Q9H0W5 538 aaPredicted RBP4.07□□□□□ -1.76
CD44-234ENST00000531873 MKNK2Q9HBH9 465 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 SEMA3GQ9NS98 782 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 BSDC1Q9NW68 430 aaPredicted RBP4.07□□□□□ -1.76
CD44-234ENST00000531873 GPATCH2Q9NW75 528 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 TCFL5Q9UL49 500 aa4.07□□□□□ -1.76
CD44-234ENST00000531873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.07□□□□□ -1.76
CD44-234ENST00000531873 NPHP3-ACAD11A0A0J9YXS1 232 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 FAM155AB1AL88 458 aaPredicted RBP4.06□□□□□ -1.76
CD44-234ENST00000531873 GABRDO14764 452 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 ZEB2O60315 1214 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 FKTNO75072 461 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 PAMP19021 973 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 CLCN7P51798 805 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 PCBP3P57721 371 aaKnown RBP4.06□□□□□ -1.76
CD44-234ENST00000531873 CYP27A1Q02318 531 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 TEKQ02763 1124 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 PAK1Q13153 545 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 LRRC41Q15345 812 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 KIZQ2M2Z5 673 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 ZPBP2Q6X784 338 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 OVCH1Q7RTY7 1134 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 THAP5Q7Z6K1 395 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 NLRP10Q86W26 655 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 ZC3H7AQ8IWR0 971 aaKnown RBP4.06□□□□□ -1.76
CD44-234ENST00000531873 CNTD1Q8N815 330 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 CHST14Q8NCH0 376 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 HSPA12BQ96MM6 686 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 PTCHD1Q96NR3 888 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 SMAD5Q99717 465 aaKnown RBP4.06□□□□□ -1.76
CD44-234ENST00000531873 TRIT1Q9H3H1 467 aaKnown RBP4.06□□□□□ -1.76
CD44-234ENST00000531873 IPPKQ9H8X2 491 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.06□□□□□ -1.76
CD44-234ENST00000531873 ERVK13-1Q9NX77 482 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 B4GALT6Q9UBX8 382 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 TRHDEQ9UKU6 1024 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 PCDHA11Q9Y5I1 949 aa4.06□□□□□ -1.76
CD44-234ENST00000531873 CARMIL2Q6F5E8 1435 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 PITPNM2Q9BZ72 1349 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 SHTN1A0MZ66 631 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 CCDC66A2RUB6 948 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 AKAP10O43572 662 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 TSPAN6O43657 245 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 PRKD3O94806 890 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 FARP2O94887 1054 aaPredicted RBP4.05□□□□□ -1.76
CD44-234ENST00000531873 FKBP9O95302 570 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 SCGB1D2O95969 90 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 ESR1P03372 595 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 SOD2P04179 222 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 SRGAP2CP0DJJ0 459 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 ATP2A2P16615 1042 aaKnown RBP4.05□□□□□ -1.76
CD44-234ENST00000531873 GRK2P25098 689 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 GRK3P35626 688 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 SCNN1BP51168 640 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 TBX4P57082 545 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 IQCEQ6IPM2 695 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 RNF111Q6ZNA4 994 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 FKBP9P1Q75LS8 142 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 CPNE8Q86YQ8 564 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 PLD6Q8N2A8 252 aaKnown RBP4.05□□□□□ -1.76
CD44-234ENST00000531873 CBARPQ8N350 705 aaPredicted RBP4.05□□□□□ -1.76
CD44-234ENST00000531873 TMEM52Q8NDY8 209 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 UBE2FQ969M7 185 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 ALG1Q9BT22 464 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 METTL22Q9BUU2 404 aaPredicted RBP4.05□□□□□ -1.76
CD44-234ENST00000531873 CDADC1Q9BWV3 514 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 OSBPL1AQ9BXW6 950 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 PUS7LQ9H0K6 701 aaKnown RBP4.05□□□□□ -1.76
CD44-234ENST00000531873 EMC7Q9NPA0 242 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 PAK6Q9NQU5 681 aaPredicted RBP4.05□□□□□ -1.76
CD44-234ENST00000531873 SPTLC3Q9NUV7 552 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 ZSWIM5Q9P217 1185 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 GABBR1Q9UBS5 961 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 DUSP13Q9UII6 198 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 CBLCQ9ULV8 474 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 ZNF281Q9Y2X9 895 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 PCDHA2Q9Y5H9 948 aa4.05□□□□□ -1.76
CD44-234ENST00000531873 TNKSO95271 1327 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 TRBV23OR9-2A0A075B6M9 112 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 CCDC194A0A1B0GVG4 234 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 C7orf72A4D263 438 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 K7ESF4 209 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 PYGMP11217 842 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 LTKP29376 864 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 LSSP48449 732 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 RAB27AP51159 221 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 IL2P60568 153 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 ERVK-21P61565 698 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 ITKQ08881 620 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 PIN1Q13526 163 aaPredicted RBP4.04□□□□□ -1.76
CD44-234ENST00000531873 LAPTM5Q13571 262 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 SYDE2Q5VT97 1194 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms