RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FAM136AQ96C01 138 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 CCDC28BQ9BUN5 200 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 KRT23Q9C075 422 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 ISCUQ9H1K1 167 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 RANBP17Q9H2T7 1088 aaKnown RBP8.94□□□□□ -0.98
CSDE1-214ENST00000530886 VCXQ9H320 206 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 RBM12Q9NTZ6 932 aaKnown RBP8.94□□□□□ -0.98
CSDE1-214ENST00000530886 POLR2DO15514 142 aaKnown RBP8.94□□□□□ -0.98
CSDE1-214ENST00000530886 CDC25AP30304 524 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 HPDP32754 393 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-214ENST00000530886 HSD17B3P37058 310 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 TUBP50607 506 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 ATP11AP98196 1134 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 KLC1Q07866 573 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 IRGCQ6NXR0 463 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 ENDOVQ8N8Q3 282 aaKnown RBP8.94□□□□□ -0.98
CSDE1-214ENST00000530886 IFT74Q96LB3 600 aa8.94□□□□□ -0.98
CSDE1-214ENST00000530886 PHF20L1A8MW92 1017 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 PJA2O43164 708 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 HEXIM1O94992 359 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 CCDC166P0CW27 439 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 ECHS1P30084 290 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 MSH2P43246 934 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 NLRP5P59047 1200 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 KCNJ2P63252 427 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 LACTBP83111 547 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 PLS1Q14651 629 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 TSR1Q2NL82 804 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 CFAP221Q4G0U5 840 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 ARHGAP18Q8N392 663 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 MB21D1Q8N884 522 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 PBKQ96KB5 322 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 AGAP3Q96P47 875 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 FAM167BQ9BTA0 163 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 THAP9Q9H5L6 903 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 G3BP2Q9UN86 482 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 SRPRBQ9Y5M8 271 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 ATRNO75882 1429 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 MROH7Q68CQ1 1323 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 C1orf167Q5SNV9 1468 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 A0A1W2PQJ5 194 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 M0R2C6 588 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 RANBP6O60518 1105 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 RAPGEF3O95398 923 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 OATP04181 439 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 CCNB1P14635 433 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 TMOD1P28289 359 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 HNRNPH3P31942 346 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 GBP1P32455 592 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 UAP1Q16222 522 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 FIGNQ5HY92 759 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 KRT40Q6A162 431 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 SPICE1Q8N0Z3 855 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 SHISA4Q96DD7 197 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 LTV1Q96GA3 475 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 TIPINQ9BVW5 301 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 NHEJ1Q9H9Q4 299 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 EPB41L5Q9HCM4 733 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 POLD4Q9HCU8 107 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 PDS5AQ29RF7 1337 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 STK36Q9NRP7 1315 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 PRAMEF22A3QJZ6 481 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 LGALS16A8MUM7 142 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 CES2O00748 559 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 USO1O60763 962 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 PPARAQ07869 468 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 ZRSR2Q15696 482 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 ATXN2LQ8WWM7 1075 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 IWS1Q96ST2 819 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 SUN2Q9UH99 717 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 RPL26L1Q9UNX3 145 aaKnown RBP8.93□□□□□ -0.98
CSDE1-214ENST00000530886 WDR37Q9Y2I8 494 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 PLCH1Q4KWH8 1693 aa8.93□□□□□ -0.98
CSDE1-214ENST00000530886 PLEKHG1Q9ULL1 1385 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 MYH7BA7E2Y1 1941 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 TMEM221A6NGB7 291 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 KCNJ18B7U540 433 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 COPS2P61201 443 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 KCNJ12Q14500 433 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.92□□□□□ -0.981e-6■■■■■ 34.7
CSDE1-214ENST00000530886 FGD4Q96M96 766 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 ARHGEF10LQ9HCE6 1279 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 DBF4Q9UBU7 674 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-214ENST00000530886 TMEM59LQ9UK28 342 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 UBE2Q2LH0YL09 131 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 O00370 1275 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 IGF2BP3O00425 579 aaKnown RBP eCLIP8.92□□□□□ -0.983e-6■■■□□ 19.1
CSDE1-214ENST00000530886 ATP2C2O75185 946 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 CALB2P22676 271 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 CCT6AP40227 531 aaKnown RBP8.92□□□□□ -0.98
CSDE1-214ENST00000530886 STAT6P42226 847 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 GUCY2DQ02846 1103 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 PARP6Q2NL67 630 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 GIGYF2Q6Y7W6 1299 aaKnown RBP8.92□□□□□ -0.98
CSDE1-214ENST00000530886 IRF2BP1Q8IU81 584 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 GRAMD1CQ8IYS0 662 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 PTPRN2Q92932 1015 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 DBNDD2Q9BQY9 259 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 ALG1Q9BT22 464 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 AATFQ9NY61 560 aaKnown RBP eCLIP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms