RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 PF4P02776 101 aa9.54□□□□□ -0.88
CHKA-205ENST00000530730 ZNF124Q15973 351 aa9.54□□□□□ -0.88
CHKA-205ENST00000530730 MLANAQ16655 118 aa9.54□□□□□ -0.88
CHKA-205ENST00000530730 RELL1Q8IUW5 271 aa9.54□□□□□ -0.88
CHKA-205ENST00000530730 FAM13CQ8NE31 585 aa9.54□□□□□ -0.88
CHKA-205ENST00000530730 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
CHKA-205ENST00000530730 RNF141Q8WVD5 230 aa9.54□□□□□ -0.88
CHKA-205ENST00000530730 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
CHKA-205ENST00000530730 TMEM59LQ9UK28 342 aa9.54□□□□□ -0.88
CHKA-205ENST00000530730 COL15A1P39059 1388 aa9.53□□□□□ -0.88
CHKA-205ENST00000530730 U2SURPO15042 1029 aaKnown RBP9.53□□□□□ -0.88
CHKA-205ENST00000530730 STARD3NLO95772 234 aa9.53□□□□□ -0.88
CHKA-205ENST00000530730 EIF5P55010 431 aaKnown RBP9.53□□□□□ -0.88
CHKA-205ENST00000530730 TTC5Q8N0Z6 440 aa9.53□□□□□ -0.88
CHKA-205ENST00000530730 DTWD2Q8NBA8 298 aa9.53□□□□□ -0.88
CHKA-205ENST00000530730 ZNF496Q96IT1 587 aaPredicted RBP9.53□□□□□ -0.88
CHKA-205ENST00000530730 MRS2Q9HD23 443 aa9.53□□□□□ -0.88
CHKA-205ENST00000530730 KCNH3Q9ULD8 1083 aa9.53□□□□□ -0.88
CHKA-205ENST00000530730 TJP1Q07157 1748 aa9.53□□□□□ -0.88
CHKA-205ENST00000530730 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
CHKA-205ENST00000530730 KCPQ6ZWJ8 1503 aa9.52□□□□□ -0.88
CHKA-205ENST00000530730 A0A087WZG4 1122 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 RAC2P15153 192 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 PRELPP51888 382 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 ZNF790Q6PG37 636 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 C2CD5Q86YS7 1000 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 C16orf71Q8IYS4 520 aaPredicted RBP9.52□□□□□ -0.89
CHKA-205ENST00000530730 TTLL6Q8N841 843 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 PPP1R16BQ96T49 567 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 GPATCH2Q9NW75 528 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 SLAMF8Q9P0V8 285 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 MRC1P22897 1456 aa9.52□□□□□ -0.89
CHKA-205ENST00000530730 ADAMTS7Q9UKP4 1686 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 SCN11AQ9UI33 1791 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 H0YIN7 160 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 TSPAN15O95858 294 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 HTRA3P83110 453 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 TEFQ10587 303 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 FSTL1Q12841 308 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 MPP2Q14168 576 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 KRTAP19-4Q3LI73 84 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 TBC1D9BQ66K14 1250 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 TTC6Q86TZ1 520 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 TSPYL5Q86VY4 417 aaPredicted RBP9.51□□□□□ -0.89
CHKA-205ENST00000530730 PHACTR3Q96KR7 559 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 TEX13AQ9BXU3 409 aaPredicted RBP9.51□□□□□ -0.89
CHKA-205ENST00000530730 KCNQ5Q9NR82 932 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 REV1Q9UBZ9 1251 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 VTI1BQ9UEU0 232 aa9.51□□□□□ -0.89
CHKA-205ENST00000530730 KCNQ3O43525 872 aa9.5□□□□□ -0.89
CHKA-205ENST00000530730 HPXP02790 462 aa9.5□□□□□ -0.89
CHKA-205ENST00000530730 A1BGP04217 495 aa9.5□□□□□ -0.89
CHKA-205ENST00000530730 TPP2P29144 1249 aaPredicted RBP9.5□□□□□ -0.89
CHKA-205ENST00000530730 GBP2P32456 591 aaPredicted RBP9.5□□□□□ -0.89
CHKA-205ENST00000530730 CCDC27Q2M243 656 aa9.5□□□□□ -0.89
CHKA-205ENST00000530730 MPZL3Q6UWV2 235 aa9.5□□□□□ -0.89
CHKA-205ENST00000530730 POLR3KQ9Y2Y1 108 aaPredicted RBP9.5□□□□□ -0.89
CHKA-205ENST00000530730 NPC1L1Q9UHC9 1359 aa9.5□□□□□ -0.89
CHKA-205ENST00000530730 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
CHKA-205ENST00000530730 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
CHKA-205ENST00000530730 DNAJC25-GNG10A0A024R161 153 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 GLTPD2A6NH11 291 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 HTR3BO95264 441 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 GARTP22102 1010 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 IL6STP40189 918 aaPredicted RBP9.49□□□□□ -0.89
CHKA-205ENST00000530730 RALGPS1Q5JS13 557 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 ERMP1Q7Z2K6 904 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 REC114Q7Z4M0 266 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 CREG2Q8IUH2 290 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 CILP2Q8IUL8 1156 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 BRIP1Q9BX63 1249 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 ASPNQ9BXN1 380 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 CARMIL3Q8ND23 1372 aa9.49□□□□□ -0.89
CHKA-205ENST00000530730 VEGFAP15692 232 aaPredicted RBP9.48□□□□□ -0.89
CHKA-205ENST00000530730 PRKAR2BP31323 418 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 PDE6BP35913 854 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 ZEB1P37275 1124 aaPredicted RBP9.48□□□□□ -0.89
CHKA-205ENST00000530730 TAGLNQ01995 201 aaKnown RBP9.48□□□□□ -0.89
CHKA-205ENST00000530730 PRR5LQ6MZQ0 368 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 PRR23BQ6ZRT6 265 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 ABHD4Q8TB40 342 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 ZNF622Q969S3 477 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHKA-205ENST00000530730 CCDC74BQ96LY2 380 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 LRRC3Q9BY71 257 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 DUSP13Q9UII6 198 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 USP16Q9Y5T5 823 aa9.48□□□□□ -0.89
CHKA-205ENST00000530730 COL3A1P02461 1466 aaPredicted RBP9.47□□□□□ -0.89
CHKA-205ENST00000530730 ARFGEF1Q9Y6D6 1849 aa9.47□□□□□ -0.89
CHKA-205ENST00000530730 CAMTA2O94983 1202 aa9.47□□□□□ -0.89
CHKA-205ENST00000530730 SNAP47Q5SQN1 464 aa9.47□□□□□ -0.89
CHKA-205ENST00000530730 LCE1DQ5T752 114 aa9.47□□□□□ -0.89
CHKA-205ENST00000530730 SMC1BQ8NDV3 1235 aa9.47□□□□□ -0.89
CHKA-205ENST00000530730 CEMIPQ8WUJ3 1361 aa9.47□□□□□ -0.89
CHKA-205ENST00000530730 RBM47A0AV96 593 aaKnown RBP9.46□□□□□ -0.9
CHKA-205ENST00000530730 PRAMEF22A3QJZ6 481 aa9.46□□□□□ -0.9
CHKA-205ENST00000530730 WASH4PA8MWX3 477 aa9.46□□□□□ -0.9
CHKA-205ENST00000530730 F6X3S4 739 aa9.46□□□□□ -0.9
CHKA-205ENST00000530730 RBAK-RBAKDNI3L0D1 243 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms