RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 EDNRBP24530 442 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 HOXA13P31271 388 aaPredicted RBP7.69□□□□□ -1.18
CD44-221ENST00000526000 RFC2P35250 354 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 PTPN11Q06124 597 aaPredicted RBP7.69□□□□□ -1.18
CD44-221ENST00000526000 ARHGAP1Q07960 439 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 HIC1Q14526 733 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 STXBP2Q15833 593 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 QRICH1Q2TAL8 776 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 ZNF618Q5T7W0 954 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 CWC27Q6UX04 472 aaKnown RBP7.69□□□□□ -1.18
CD44-221ENST00000526000 LRRC8DQ7L1W4 858 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 FBXO11Q86XK2 927 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 DHX37Q8IY37 1157 aaKnown RBP7.69□□□□□ -1.18
CD44-221ENST00000526000 STAG2Q8N3U4 1231 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 PNMA1Q8ND90 353 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 DNERQ8NFT8 737 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 NSUN6Q8TEA1 469 aaKnown RBP7.69□□□□□ -1.18
CD44-221ENST00000526000 PIBF1Q8WXW3 757 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 TTC14Q96N46 770 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 C1QTNF1Q9BXJ1 281 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 OSBPL7Q9BZF2 842 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 KAT14Q9H8E8 782 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 DDX41Q9UJV9 622 aaKnown RBP7.69□□□□□ -1.18
CD44-221ENST00000526000 MRVI1Q9Y6F6 885 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 NEDD4P46934 1319 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 SCN5AQ14524 2016 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 PITPNM1O00562 1244 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 SNHG28P0DPA3 235 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 SDSP20132 328 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 POU3F3P20264 500 aaPredicted RBP7.68□□□□□ -1.18
CD44-221ENST00000526000 KCNA5P22460 613 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 SSTR3P32745 418 aaPredicted RBP7.68□□□□□ -1.18
CD44-221ENST00000526000 PLA2G5P39877 138 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 THPOP40225 353 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 IKBKEQ14164 716 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 MFSD10Q14728 455 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 DGKDQ16760 1214 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 KIAA0753Q2KHM9 967 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 TMEM31Q5JXX7 168 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 FCHSD1Q86WN1 690 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 MYOCDQ8IZQ8 938 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 CCDC155Q8N6L0 562 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 DBF4BQ8NFT6 615 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 TET1Q8NFU7 2136 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 AFAP1L1Q8TED9 768 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 ESR2Q92731 530 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 GPKOWQ92917 476 aaPredicted RBP eCLIP7.68□□□□□ -1.18
CD44-221ENST00000526000 RAD9AQ99638 391 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 C17orf80Q9BSJ5 609 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 JMJD4Q9H9V9 463 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 ZSWIM5Q9P217 1185 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 GTF2IRD1Q9UHL9 959 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 COG5Q9UP83 839 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 MRPL11Q9Y3B7 192 aaKnown RBP7.68□□□□□ -1.18
CD44-221ENST00000526000 CCDC171Q6TFL3 1326 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 WDR19Q8NEZ3 1342 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 SALL3Q9BXA9 1300 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 MYH7P12883 1935 aa7.68□□□□□ -1.18
CD44-221ENST00000526000 EYSQ5T1H1 3165 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 LOC102724159A0A0B4J2E5 919 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 LINC01553A4QN01 128 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 EIF3JO75822 258 aaKnown RBP7.67□□□□□ -1.18
CD44-221ENST00000526000 GJB5O95377 273 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 GGPS1O95749 300 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 CTSHP09668 335 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 PARP1P09874 1014 aaKnown RBP7.67□□□□□ -1.18
CD44-221ENST00000526000 IL9P15248 144 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 SP2Q02086 613 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 MBTPS1Q14703 1052 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 PWP2Q15269 919 aaKnown RBP7.67□□□□□ -1.18
CD44-221ENST00000526000 GPATCH4Q5T3I0 446 aaKnown RBP7.67□□□□□ -1.18
CD44-221ENST00000526000 CNKSR3Q6P9H4 555 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 DGKHQ86XP1 1220 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 HOMER1Q86YM7 354 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 MCF2L2Q86YR7 1114 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 RGS22Q8NE09 1264 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 IL31RAQ8NI17 732 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 CAGE1Q8TC20 777 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 SPATA33Q96N06 139 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 TGS1Q96RS0 853 aaKnown RBP7.67□□□□□ -1.18
CD44-221ENST00000526000 ZSCAN10Q96SZ4 725 aaPredicted RBP7.67□□□□□ -1.18
CD44-221ENST00000526000 RNF41Q9H4P4 317 aaPredicted RBP7.67□□□□□ -1.18
CD44-221ENST00000526000 PXMP2Q9NR77 195 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 RTEL1Q9NZ71 1219 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 SUPT16HQ9Y5B9 1047 aaKnown RBP7.67□□□□□ -1.18
CD44-221ENST00000526000 ABCB11O95342 1321 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 NCOR1O75376 2440 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 VCANP13611 3396 aa7.67□□□□□ -1.18
CD44-221ENST00000526000 ABHD14A-ACY1A0A1B0GW23 586 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 RSPH10B2B2RC85 870 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 H3BQ06 376 aaPredicted RBP7.66□□□□□ -1.18
CD44-221ENST00000526000 PPP1R11O60927 126 aaPredicted RBP7.66□□□□□ -1.18
CD44-221ENST00000526000 LGR5O75473 907 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 RGS20O76081 388 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 BAIAP3O94812 1187 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 RSPH10BP0C881 870 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 ERVK-21P61565 698 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 SP4Q02446 784 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 PTK7Q13308 1070 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms