RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MSMPQ1L6U9 139 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 SGO2Q562F6 1265 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 OGFOD2Q6N063 350 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 NECAB2Q7Z6G3 386 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 FBXL6Q8N531 539 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.49□□□□□ -1.05
SDCBP-210ENST00000522843 FAM161BQ96MY7 647 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 WRNIP1Q96S55 665 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 OSBPL1AQ9BXW6 950 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 TMEM63CQ9P1W3 806 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 SALL4Q9UJQ4 1053 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 FAM205AQ6ZU69 1335 aa8.49□□□□□ -1.05
SDCBP-210ENST00000522843 PRNPP04156 253 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 CSF1RP07333 972 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 FCGRTP55899 365 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 JAG1P78504 1218 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 PPATQ06203 517 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 CWF19L2Q2TBE0 894 aaKnown RBP8.48□□□□□ -1.05
SDCBP-210ENST00000522843 FAM109BQ6ICB4 259 aaPredicted RBP8.48□□□□□ -1.05
SDCBP-210ENST00000522843 FBXL18Q96ME1 805 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 CNTN3Q9P232 1028 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 KANSL3Q9P2N6 904 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 TTF2Q9UNY4 1162 aaKnown RBP8.48□□□□□ -1.05
SDCBP-210ENST00000522843 MAP3K2Q9Y2U5 619 aa8.48□□□□□ -1.05
SDCBP-210ENST00000522843 DDX60LQ5H9U9 1706 aaKnown RBP8.48□□□□□ -1.05
SDCBP-210ENST00000522843 ELL2O00472 640 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-210ENST00000522843 ZNF853P0CG23 659 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 CRKP46108 304 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 KCNJ4P48050 445 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 LMOD3Q0VAK6 560 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 C19orf57Q0VDD7 668 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 CBLL1Q75N03 491 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 UBE3BQ7Z3V4 1068 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 C12orf50Q8NA57 414 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-210ENST00000522843 ASIC4Q96FT7 647 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 PLA2G12BQ9BX93 195 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.47□□□□□ -1.058e-21■■■■■ 43.8
SDCBP-210ENST00000522843 PNNQ9H307 717 aaKnown RBP8.47□□□□□ -1.05
SDCBP-210ENST00000522843 PFASO15067 1338 aa8.47□□□□□ -1.05
SDCBP-210ENST00000522843 PI4KAP2A4QPH2 592 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 CARNS1A5YM72 827 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 PDE2AO00408 941 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-210ENST00000522843 CAPN2P17655 700 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 MFSD14BQ5SR56 506 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 MIGA2Q7L4E1 593 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 ZNF438Q7Z4V0 828 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 ZNF804AQ7Z570 1209 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 CCDC146Q8IYE0 955 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 PI4KAP1Q8N8J0 262 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 SMG8Q8ND04 991 aaKnown RBP8.46□□□□□ -1.06
SDCBP-210ENST00000522843 TDRD7Q8NHU6 1098 aaKnown RBP8.46□□□□□ -1.06
SDCBP-210ENST00000522843 MPHOSPH8Q99549 860 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 CDX2Q99626 313 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-210ENST00000522843 DZANK1Q9NVP4 752 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 SOX13Q9UN79 622 aa8.46□□□□□ -1.06
SDCBP-210ENST00000522843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-210ENST00000522843 TNNI2P48788 182 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 KSR2Q6VAB6 950 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 ATCAYQ86WG3 371 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 TP53INP2Q8IXH6 220 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 C8orf58Q8NAV2 365 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 MAFAQ8NHW3 353 aaPredicted RBP8.45□□□□□ -1.06
SDCBP-210ENST00000522843 PARK7Q99497 189 aaKnown RBP8.45□□□□□ -1.06
SDCBP-210ENST00000522843 TMPRSS13Q9BYE2 586 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 SUGCTQ9HAC7 445 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 CYP4F12Q9HCS2 524 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 ZNF112Q9UJU3 913 aa8.45□□□□□ -1.06
SDCBP-210ENST00000522843 FAM95CA0A1B0GW59 222 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
SDCBP-210ENST00000522843 COL6A1P12109 1028 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 ACPPP15309 386 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 CES1P23141 567 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 PLA2G5P39877 138 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 GYG1P46976 350 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 NFKBIBQ15653 356 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 HGSNATQ68CP4 663 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 APOBEC3HQ6NTF7 200 aaKnown RBP8.44□□□□□ -1.06
SDCBP-210ENST00000522843 XKR5Q6UX68 686 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 NFXL1Q6ZNB6 911 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 VSIG10LQ86VR7 867 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 POU5F2Q8N7G0 328 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 C1orf127Q8N9H9 656 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 FAM84BQ96KN1 310 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-210ENST00000522843 ZNF341Q9BYN7 854 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 C11orf49Q9H6J7 331 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 RPAP1Q9BWH6 1393 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-210ENST00000522843 DNAH12Q6ZR08 3092 aa8.44□□□□□ -1.06
SDCBP-210ENST00000522843 PLXNB2O15031 1838 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 TNPO2O14787 897 aaKnown RBP8.43□□□□□ -1.06
SDCBP-210ENST00000522843 TIAF1O95411 115 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 C8AP07357 584 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 FOXO4P98177 505 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 GCKRQ14397 625 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 LRRC26Q2I0M4 334 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 NOL9Q5SY16 702 aaKnown RBP8.43□□□□□ -1.06
SDCBP-210ENST00000522843 PAOXQ6QHF9 649 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 G2E3Q7L622 706 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 FAM83AQ86UY5 434 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 SHISA5Q8N114 240 aa8.43□□□□□ -1.06
SDCBP-210ENST00000522843 MYLIPQ8WY64 445 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms