RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 IER2Q9BTL4 223 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 C11orf84Q9BUA3 381 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF747Q9BV97 191 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DSCC1Q9BVC3 393 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 YIPF2Q9BWQ6 316 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LNPKQ9C0E8 428 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CEP44Q9C0F1 390 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 IPPKQ9H8X2 491 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF408Q9H9D4 720 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MKNK2Q9HBH9 465 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 AS3MTQ9HBK9 375 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ARHGEF4Q9NR80 690 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KCNQ5Q9NR82 932 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MRPS18AQ9NVS2 196 aaKnown RBP0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GPATCH2Q9NW75 528 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 UCKL1Q9NWZ5 548 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PPP4R2Q9NY27 417 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 AKT3Q9Y243 479 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 EPB41L3Q9Y2J2 1087 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MAP3K2Q9Y2U5 619 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 COQ6Q9Y2Z9 468 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 IRAK3Q9Y616 596 aa0.65□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SYNGAP1Q96PV0 1343 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SSU72P8A0A1W2PR75 194 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 C2orf78A6NCI8 922 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MGST3O14880 152 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 EFCAB14O75071 495 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DDAH1O94760 285 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KLHL18O94889 574 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CNOT4O95628 575 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 BPNT1O95861 308 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MPIG6BO95866 241 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ITGB3P05106 788 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 C6orf222P0C671 652 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 HNRNPLP14866 589 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF20P17024 532 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GUCY2CP25092 1073 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KCNJ6P48051 423 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KCNC1P48547 511 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SARSP49591 514 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FXR1P51114 621 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PMS1P54277 932 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PCBP3P57721 371 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RPS26P62854 115 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PPP2R2AP63151 447 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CCT2P78371 535 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ATP2C1P98194 919 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CD83Q01151 205 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PFKPQ01813 784 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 COL10A1Q03692 680 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FOXL1Q12952 345 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF460Q14592 562 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PKN1Q16512 942 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZXDCQ2QGD7 858 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KRTAP15-1Q3LI76 137 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SV2CQ496J9 727 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 UBXN11Q5T124 520 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 AGBL4Q5VU57 503 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TCERG1LQ5VWI1 586 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SP5Q6BEB4 398 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TCTN3Q6NUS6 607 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZC3H14Q6PJT7 736 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 VHLLQ6RSH7 139 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TEPPQ6URK8 271 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 Q6ZRM9 215 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 USP53Q70EK8 1073 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TMPRSS7Q7RTY8 843 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 THAP5Q7Z6K1 395 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TAX1BP1Q86VP1 789 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF227Q86WZ6 799 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MCF2L2Q86YR7 1114 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KIAA0825Q8IV33 1275 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZSCAN29Q8IWY8 852 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ELOA2Q8IYF1 753 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RPUSD2Q8IZ73 545 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FUKQ8N0W3 1084 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 STK11IPQ8N1F8 1099 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NXPE1Q8N323 547 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF808Q8N4W9 903 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CISD2Q8N5K1 135 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 UBR7Q8N806 425 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 OR14K1Q8NGZ2 314 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GIMAP7Q8NHV1 300 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 USP33Q8TEY7 942 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CFHR4Q92496 578 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LARP4BQ92615 738 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ERCC4Q92889 916 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MISP3Q96FF7 219 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RPL10LQ96L21 214 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TOX2Q96NM4 488 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SLC2A13Q96QE2 648 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 AGAP2Q99490 1192 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MLST8Q9BVC4 326 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MRIQ9BWK5 157 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NT5C1AQ9BXI3 368 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MEGF9Q9H1U4 602 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PIF1Q9H611 641 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CAPN10Q9HC96 672 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GMIPQ9P107 970 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DBR1Q9UK59 544 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms