RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CDADC1Q9BWV3 514 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 AP5S1Q9NUS5 200 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 CRCT1Q9UGL9 99 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 MMP24Q9Y5R2 645 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 TBC1D4O60343 1298 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 PRMT3O60678 531 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 PAGE1O75459 146 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 IGLV2-14P01704 120 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 COL6A1P12109 1028 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 CR2P20023 1033 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 NR4A1P22736 598 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 CCT4P50991 539 aaKnown RBP0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 COL4A4P53420 1690 aaPredicted RBP0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 TRIM26Q12899 539 aaPredicted RBP0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 GPR155Q7Z3F1 870 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 BMP8AQ7Z5Y6 402 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 FOXP4Q8IVH2 680 aaPredicted RBP0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 MCATQ8IVS2 390 aaKnown RBP0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 DNAJC5GQ8N7S2 189 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 NUDT10Q8NFP7 164 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 PROKR1Q8TCW9 393 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 ZNF384Q8TF68 577 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 NR4A3Q92570 626 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 TAF15Q92804 592 aaKnown RBP eCLIP0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 LENG9Q96B70 501 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 NUDT11Q96G61 164 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 DPYSL5Q9BPU6 564 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 PLA2G12BQ9BX93 195 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 NPHS2Q9NP85 383 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 ERRFI1Q9UJM3 462 aaPredicted RBP0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 PROCRQ9UNN8 238 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 GIT1Q9Y2X7 761 aa0.51□□□□□ -2.33
RNU6-542P-201ENST00000516405 FAM196BA6NMK8 535 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 UPK3BL1B0FP48 263 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 UPK3BL2E5RIL1 263 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 MATN2O00339 956 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 C1QL1O75973 258 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 KLHL18O94889 574 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 ZNF205O95201 554 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 SNHG28P0DPA3 235 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 PTGER1P34995 402 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 MSX2P35548 267 aaPredicted RBP0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 ZNF134P52741 427 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 KRTAP12-2P59991 146 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 OCA2Q04671 838 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 SNW1Q13573 536 aaKnown RBP0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 TOB2Q14106 344 aaPredicted RBP0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 PTPAQ15257 358 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 WIPI1Q5MNZ9 446 aaPredicted RBP0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 Q6YL49 198 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 ETV3LQ6ZN32 361 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 ZNF276Q8N554 614 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 CYB5D2Q8WUJ1 264 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 ACSF2Q96CM8 615 aaPredicted RBP0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 FTSJ1Q9UET6 329 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 OAZ3Q9UMX2 235 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 PTPN22Q9Y2R2 807 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 SIT1Q9Y3P8 196 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 KLF2Q9Y5W3 355 aaPredicted RBP0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 HS3ST4Q9Y661 456 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 KAT6AQ92794 2004 aa0.5□□□□□ -2.33
RNU6-542P-201ENST00000516405 ZNF521Q96K83 1311 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 GFRA2O00451 464 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 CDC14BO60729 498 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 ZBTB7AO95365 584 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 CSF2RBP32927 897 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 RAC3P60763 192 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 RNF151Q2KHN1 245 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 CR1LQ2VPA4 569 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 RTP2Q5QGT7 225 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 LY6G5CQ5SRR4 150 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 LLGL2Q6P1M3 1020 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 DTHD1Q6ZMT9 781 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 Q6ZUG5 572 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 SGMS1Q86VZ5 419 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 MIB1Q86YT6 1006 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 THEMISQ8N1K5 641 aaPredicted RBP0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 DTX3Q8N9I9 347 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 KREMEN2Q8NCW0 462 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 NLGN2Q8NFZ4 835 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 SLC25A43Q8WUT9 341 aaPredicted RBP0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 PEX11GQ96HA9 241 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 ASPNQ9BXN1 380 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 ASCC2Q9H1I8 757 aaPredicted RBP0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 SNCAIPQ9Y6H5 919 aa0.49□□□□□ -2.33
RNU6-542P-201ENST00000516405 WIPF3A6NGB9 483 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 LRRC3CA6NJW4 275 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 PRSS44E7EML9 344 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 ENC1O14682 589 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 PPP1R11O60927 126 aaPredicted RBP0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 FAM20BO75063 409 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 PRAMEF1O95521 474 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 ABHD16AO95870 558 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 PGRP06401 933 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 CTSKP43235 329 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 MAPK8P45983 427 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 EIF1AXP47813 144 aaKnown RBP0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 SCNN1GP51170 649 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 FCGRTP55899 365 aa0.48□□□□□ -2.33
RNU6-542P-201ENST00000516405 CORO7P57737 925 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms