RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ZGLP1P0C6A0 271 aa6.09□□□□□ -1.43
CLDND1-228ENST00000513873 AMPD2Q01433 879 aa6.09□□□□□ -1.43
CLDND1-228ENST00000513873 ZSWIM9Q86XI8 627 aa6.09□□□□□ -1.43
CLDND1-228ENST00000513873 LILRA2Q8N149 483 aa6.09□□□□□ -1.43
CLDND1-228ENST00000513873 BVESQ8NE79 360 aa6.09□□□□□ -1.43
CLDND1-228ENST00000513873 SREK1Q8WXA9 508 aaKnown RBP6.09□□□□□ -1.43
CLDND1-228ENST00000513873 ARMC5Q96C12 935 aa6.09□□□□□ -1.43
CLDND1-228ENST00000513873 RCC1LQ96I51 464 aaKnown RBP6.09□□□□□ -1.43
CLDND1-228ENST00000513873 FCRL2Q96LA5 508 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-228ENST00000513873 TNFRSF10DQ9UBN6 386 aa6.09□□□□□ -1.43
CLDND1-228ENST00000513873 INO80Q9ULG1 1556 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-228ENST00000513873 ABCC3O15438 1527 aa6.09□□□□□ -1.44
CLDND1-228ENST00000513873 SCAF11Q99590 1463 aaKnown RBP6.09□□□□□ -1.44
CLDND1-228ENST00000513873 KIF3BO15066 747 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 KCNA6P17658 529 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 YY1P25490 414 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 CTSKP43235 329 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 KIR2DL1P43626 348 aaPredicted RBP6.08□□□□□ -1.44
CLDND1-228ENST00000513873 KIR2DL2P43627 348 aaPredicted RBP6.08□□□□□ -1.44
CLDND1-228ENST00000513873 RAB33AQ14088 237 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 MLANAQ16655 118 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 CEP128Q6ZU80 1094 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 JAMLQ86YT9 394 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 CILP2Q8IUL8 1156 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 ARHGEF39Q8N4T4 335 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 EPN3Q9H201 632 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 CWC22Q9HCG8 908 aaKnown RBP6.08□□□□□ -1.44
CLDND1-228ENST00000513873 CGGBP1Q9UFW8 167 aaPredicted RBP6.08□□□□□ -1.44
CLDND1-228ENST00000513873 UBR1Q8IWV7 1749 aa6.08□□□□□ -1.44
CLDND1-228ENST00000513873 MSH6P52701 1360 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 B2RBV5 119 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 KCNH1O95259 989 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 GJB6O95452 261 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 TBC1D8O95759 1140 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 HPXP02790 462 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 SEPHS1P49903 392 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 RBM10P98175 930 aaKnown RBP6.07□□□□□ -1.44
CLDND1-228ENST00000513873 GRB10Q13322 594 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 DDR2Q16832 855 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 DPY19L1Q2PZI1 675 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 NBPF6Q5VWK0 638 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 HLA-DQA1Q5Y7H0 255 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 CYP2R1Q6VVX0 501 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 C1QL4Q86Z23 238 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 MAP6Q96JE9 813 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 NBPF4Q96M43 638 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 SLC12A9Q9BXP2 914 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 AP5S1Q9NUS5 200 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 GPR160Q9UJ42 338 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 RPRD2Q5VT52 1461 aaKnown RBP6.07□□□□□ -1.44
CLDND1-228ENST00000513873 CFAP65Q6ZU64 1925 aaKnown RBP6.07□□□□□ -1.44
CLDND1-228ENST00000513873 CCDC144AA2RUR9 1427 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 NHSL1Q5SYE7 1610 aa6.07□□□□□ -1.44
CLDND1-228ENST00000513873 AHDC1Q5TGY3 1603 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-228ENST00000513873 NWD1Q149M9 1564 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 WASHC2CQ9Y4E1 1318 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 SLIT1O75093 1534 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 PRDM15P57071 1507 aaPredicted RBP6.06□□□□□ -1.44
CLDND1-228ENST00000513873 TMEM82A0PJX8 343 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 IQCA1LA6NCM1 817 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 WTIPA6NIX2 430 aaPredicted RBP6.06□□□□□ -1.44
CLDND1-228ENST00000513873 KLF4O43474 513 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 SUSD5O60279 629 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 VAMP4O75379 141 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 GLI1P08151 1106 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 RTP1P59025 263 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 SNX17Q15036 470 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 NR0B2Q15466 257 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 GALNT18Q6P9A2 607 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 LINC01599Q8WXQ3 324 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 DRC1Q96MC2 740 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 SUSD2Q9UGT4 822 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 TAF6LQ9Y6J9 622 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 CROCC2H7BZ55 1655 aa6.06□□□□□ -1.44
CLDND1-228ENST00000513873 ARHGAP23Q9P227 1491 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 TRBV23OR9-2A0A075B6M9 112 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 C2orf71A6NGG8 1288 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 USP2O75604 605 aaPredicted RBP6.05□□□□□ -1.44
CLDND1-228ENST00000513873 INHBBP09529 407 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 ERVFC1P60507 584 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 EEF1DP3Q658K8 133 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 ZPBP2Q6X784 338 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 CELF2-AS1Q8N7Q2 184 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 FCRL3Q96P31 734 aaPredicted RBP6.05□□□□□ -1.44
CLDND1-228ENST00000513873 C19orf44Q9H6X5 657 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 C19orf73Q9NVV2 129 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 SIRPGQ9P1W8 387 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 ZNF281Q9Y2X9 895 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 EMC9Q9Y3B6 208 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 BACE2Q9Y5Z0 518 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 EID1Q9Y6B2 187 aa6.05□□□□□ -1.44
CLDND1-228ENST00000513873 NKTRP30414 1462 aaKnown RBP6.04□□□□□ -1.44
CLDND1-228ENST00000513873 A0A1W2PQ45 241 aaPredicted RBP6.04□□□□□ -1.44
CLDND1-228ENST00000513873 A0A1W2PQY0 241 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 CCDC85CA6NKD9 419 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 NFIBO00712 420 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
CLDND1-228ENST00000513873 ARL4AP40617 200 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms