RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TMEM39BQ9GZU3 492 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 THAP9Q9H5L6 903 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 CYP3A7-CYP3A51PA0A087WV96 503 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 BICDL2A1A5D9 508 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 SOWAHDA6NJG2 315 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 PP2D1A8MPX8 630 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 SLC26A4O43511 780 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 KIF5CO60282 957 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 TDP2O95551 362 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 GYPCP04921 128 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 CYP3A7P24462 503 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 CDC25AP30304 524 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 STAT2P52630 851 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 UBE2SQ16763 222 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 ERCC6LQ2NKX8 1250 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 NBPF9Q3BBW0 867 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 FBXO38Q6PIJ6 1188 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 CPLX3Q8WVH0 158 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 CRYGNQ8WXF5 182 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 DHTKD1Q96HY7 919 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 MBOAT7Q96N66 472 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 DESI2Q9BSY9 194 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 TAB2Q9NYJ8 693 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 GDAQ9Y2T3 454 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
PRPF40B-203ENST00000508736 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 MEIS2O14770 477 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 SLC37A4O43826 429 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 ASNSP08243 561 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 EPS15P42566 896 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 TECP42680 631 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 CYP26C1Q6V0L0 522 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 GIMAP8Q8ND71 665 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 CALML4Q96GE6 196 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 NUP88Q99567 741 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 VPS16Q9H269 839 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 VCPKMTQ9H867 229 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 EXOC1Q9NV70 894 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 GPRC5DQ9NZD1 345 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 STK17AQ9UEE5 414 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 PRR12Q9ULL5 1215 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 PIK3CDO00329 1044 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 TADA3O75528 432 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 H2AFXP16104 143 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 PLCG1P19174 1290 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 HOXA7P31268 230 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 TXKP42681 527 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 ECE1P42892 770 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 MAP3K9P80192 1104 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 UBXN1Q04323 297 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 TUBB2AQ13885 445 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 ARHGAP29Q52LW3 1261 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 CHURC1Q8WUH1 139 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 WDR24Q96S15 920 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 MMTAG2Q9BU76 263 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 TUBB2BQ9BVA1 445 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 ANO3Q9BYT9 981 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 ABHD10Q9NUJ1 306 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 LRWD1Q9UFC0 647 aa12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 DDX25Q9UHL0 483 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-203ENST00000508736 A0A1W2PQC6 194 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 LGALS16A8MUM7 142 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 KLRC4O43908 158 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 MTF1Q14872 753 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 TBC1D10BQ4KMP7 808 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 RAD9BQ6WBX8 426 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 FAM160B2Q86V87 743 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 ACER1Q8TDN7 264 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 C7orf25Q9BPX7 421 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 CARD6Q9BX69 1037 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 MRPL44Q9H9J2 332 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 MRFAP1Q9Y605 127 aa12.9□□□□□ -0.34
PRPF40B-203ENST00000508736 USP17L15C9J2P7 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L13C9JLJ4 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L11C9JVI0 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L18D6R9N7 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L22D6RA61 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L17D6RBQ6 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L19D6RCP7 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L20D6RJB6 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 TBX3O15119 743 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 EGFRP00533 1210 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 FXR1P51114 621 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 ASIC1P78348 528 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 PPP2R3AQ06190 1150 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L24Q0WX57 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 RASA3Q14644 834 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 CNNM4Q6P4Q7 775 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 CREBRFQ8IUR6 639 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 KRT222Q8N1A0 295 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms