RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 ORC4O43929 436 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 RANBP6O60518 1105 aaKnown RBP10.64□□□□□ -0.71
RPS3A-206ENST00000507485 PPIGQ13427 754 aaKnown RBP eCLIP10.64□□□□□ -0.71
RPS3A-206ENST00000507485 ITGA7Q13683 1181 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 BAATQ14032 418 aaPredicted RBP10.64□□□□□ -0.71
RPS3A-206ENST00000507485 ADGRE1Q14246 886 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 FSCN1Q16658 493 aaKnown RBP10.64□□□□□ -0.71
RPS3A-206ENST00000507485 TKFCQ3LXA3 575 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 NSMFQ6X4W1 530 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 ZNF589Q86UQ0 364 aaPredicted RBP10.64□□□□□ -0.71
RPS3A-206ENST00000507485 TMEM47Q9BQJ4 181 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 RANBP17Q9H2T7 1088 aaKnown RBP10.64□□□□□ -0.71
RPS3A-206ENST00000507485 PRDM12Q9H4Q4 367 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 SPC25Q9HBM1 224 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 CCPG1Q9ULG6 757 aa10.64□□□□□ -0.71
RPS3A-206ENST00000507485 YBX2Q9Y2T7 364 aaKnown RBP10.64□□□□□ -0.71
RPS3A-206ENST00000507485 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 B4GALT4O60513 344 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 FGAP02671 866 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 ICAM1P05362 532 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 SLC3A2P08195 630 aaKnown RBP10.63□□□□□ -0.71
RPS3A-206ENST00000507485 PDE1AP54750 535 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 CCL23P55773 120 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 ALX1Q15699 326 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 LRRFIP1Q32MZ4 808 aaKnown RBP10.63□□□□□ -0.71
RPS3A-206ENST00000507485 ANKRD45Q5TZF3 282 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 BTNL9Q6UXG8 535 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 SLC30A10Q6XR72 485 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 NOL8Q76FK4 1167 aaKnown RBP10.63□□□□□ -0.71
RPS3A-206ENST00000507485 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 CLEC4DQ8WXI8 215 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 CRBNQ96SW2 442 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 NOC4LQ9BVI4 516 aaKnown RBP10.63□□□□□ -0.71
RPS3A-206ENST00000507485 GPCPD1Q9NPB8 672 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 IL23AQ9NPF7 189 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 SCN5AQ14524 2016 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 ALDH5A1P51649 535 aaPredicted RBP10.63□□□□□ -0.71
RPS3A-206ENST00000507485 RRP1P56182 461 aaKnown RBP10.63□□□□□ -0.71
RPS3A-206ENST00000507485 HAND2P61296 217 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 NMIQ13287 307 aaPredicted RBP10.63□□□□□ -0.71
RPS3A-206ENST00000507485 CCDC96Q2M329 555 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 IQSEC1Q6DN90 963 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 TBC1D10CQ8IV04 446 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 TMEM199Q8N511 208 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 DCAF4Q8WV16 495 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 HERVK_113Q902F9 699 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 SCLYQ96I15 445 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 NKX2-4Q9H2Z4 354 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 HIPK3Q9H422 1215 aa10.63□□□□□ -0.71
RPS3A-206ENST00000507485 CHD7Q9P2D1 2997 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 TLR3O15455 904 aaKnown RBP10.62□□□□□ -0.71
RPS3A-206ENST00000507485 HSPD1P10809 573 aaKnown RBP10.62□□□□□ -0.71
RPS3A-206ENST00000507485 PDHBP11177 359 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 MYOGP15173 224 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
RPS3A-206ENST00000507485 SYDE2Q5VT97 1194 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 PSRC1Q6PGN9 363 aaPredicted RBP10.62□□□□□ -0.71
RPS3A-206ENST00000507485 KIAA1211Q6ZU35 1233 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 OTOP2Q7RTS6 562 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 SCUBE3Q8IX30 993 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 COPS5Q92905 334 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 EVI5LQ96CN4 794 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 AP5M1Q9H0R1 490 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 VTA1Q9NP79 307 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 HELLSQ9NRZ9 838 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 TRMT13Q9NUP7 481 aaKnown RBP10.62□□□□□ -0.71
RPS3A-206ENST00000507485 MYO9BQ13459 2157 aa10.62□□□□□ -0.71
RPS3A-206ENST00000507485 SCN10AQ9Y5Y9 1956 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 RBM47A0AV96 593 aaKnown RBP10.61□□□□□ -0.71
RPS3A-206ENST00000507485 CYP2C9P11712 490 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 RABGGTBP53611 331 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 FOXC1Q12948 553 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 DUSP28Q4G0W2 176 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 PLA2G2CQ5R387 149 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 PPM1EQ8WY54 764 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 ALDH8A1Q9H2A2 487 aaPredicted RBP10.61□□□□□ -0.71
RPS3A-206ENST00000507485 TOMM22Q9NS69 142 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 TCP11L1Q9NUJ3 509 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 Q9Y3F1 56 aa10.61□□□□□ -0.71
RPS3A-206ENST00000507485 NEDD4P46934 1319 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 CABYRO75952 493 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 ARIH2O95376 493 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 FGBP02675 491 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 GOLGA8HP0CJ92 632 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 SNHG28P0DPA3 235 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 TOP1P11387 765 aaKnown RBP10.6□□□□□ -0.71
RPS3A-206ENST00000507485 PURAQ00577 322 aaKnown RBP10.6□□□□□ -0.71
RPS3A-206ENST00000507485 ZNF543Q08ER8 600 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 MCMDC2Q4G0Z9 681 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 TBC1D5Q92609 795 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 SPSB2Q99619 263 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 ZKSCAN3Q9BRR0 538 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 ZMYM6O95789 1325 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 REV3LO60673 3130 aa10.6□□□□□ -0.71
RPS3A-206ENST00000507485 PTPDC1A2A3K4 754 aa10.59□□□□□ -0.71
RPS3A-206ENST00000507485 ARHGEF15O94989 841 aa10.59□□□□□ -0.71
RPS3A-206ENST00000507485 EDNRBP24530 442 aa10.59□□□□□ -0.71
RPS3A-206ENST00000507485 CALML3P27482 149 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms