RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 FIGNQ5HY92 759 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 ANKRD40Q6AI12 368 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 OGFOD1Q8N543 542 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 NEK11Q8NG66 645 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 AGPAT5Q9NUQ2 364 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 USP17L5A8MUK1 530 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 SMARCA1P28370 1054 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 CDK17Q00537 523 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 STK4Q13043 487 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 MIIPQ5JXC2 388 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 CLEC10AQ8IUN9 316 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 CCDC170Q8IYT3 715 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 SUGCTQ9HAC7 445 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 ZBED6P86452 979 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 NONOQ15233 471 aaKnown RBP eCLIP18.87■□□□□ 0.61
LIN54-204ENST00000505397 ERGIC2Q96RQ1 377 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 MMTAG2Q9BU76 263 aaKnown RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 A0A1W2PQJ5 194 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 EIF3CLB5ME19 914 aaKnown RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 ENTPD3O75355 529 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 PDE4DQ08499 809 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 ORC2Q13416 577 aaPredicted RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 MCM6Q14566 821 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 MUM1L1Q5H9M0 696 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 CCDC122Q5T0U0 273 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 FAM114A1Q8IWE2 563 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 PURBQ96QR8 312 aaKnown RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 EIF3CQ99613 913 aaKnown RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 CPVLQ9H3G5 476 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 PPP1R1BQ9UD71 204 aaPredicted RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 ATP1A1P05023 1023 aaKnown RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 VIL1P09327 827 aaKnown RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 CASP8Q14790 479 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 CERKLQ49MI3 558 aaPredicted RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 DALRD3Q5D0E6 543 aaKnown RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 EHBP1Q8NDI1 1231 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 PRMT6Q96LA8 375 aaPredicted RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 CNOT6LQ96LI5 555 aaKnown RBP18.87■□□□□ 0.61
LIN54-204ENST00000505397 DNAJC18Q9H819 358 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 SAR1BQ9Y6B6 198 aa18.87■□□□□ 0.61
LIN54-204ENST00000505397 FRMPD2Q68DX3 1309 aaPredicted RBP18.86■□□□□ 0.61
LIN54-204ENST00000505397 FAM196BA6NMK8 535 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 CCNT1O60563 726 aaKnown RBP18.86■□□□□ 0.61
LIN54-204ENST00000505397 EIF3JO75822 258 aaKnown RBP18.86■□□□□ 0.61
LIN54-204ENST00000505397 CYLC1P35663 651 aaPredicted RBP18.86■□□□□ 0.61
LIN54-204ENST00000505397 USP14P54578 494 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 NAPAP54920 295 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 TBC1D8BQ0IIM8 1120 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 CCDC47Q96A33 483 aaKnown RBP18.86■□□□□ 0.61
LIN54-204ENST00000505397 NHEJ1Q9H9Q4 299 aaPredicted RBP18.86■□□□□ 0.61
LIN54-204ENST00000505397 C6orf50Q9HD87 102 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 HDAC6Q9UBN7 1215 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 ZNRF3Q9ULT6 936 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 SMCO2A6NFE2 343 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 PES1O00541 588 aaKnown RBP18.86■□□□□ 0.61
LIN54-204ENST00000505397 KRT86O43790 486 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 GNA11P29992 359 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 KLK7P49862 253 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 GYS2P54840 703 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 DLGAP5Q15398 846 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 LETM2Q2VYF4 491 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 NEK8Q86SG6 692 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 VAT1LQ9HCJ6 419 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 TFR2Q9UP52 801 aa18.86■□□□□ 0.61
LIN54-204ENST00000505397 COL4A5P29400 1685 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 RCCD1A6NED2 376 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 ENC1O14682 589 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 FCER1AP12319 257 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 TRIM21P19474 475 aaKnown RBP18.85■□□□□ 0.61
LIN54-204ENST00000505397 ATRNL1Q5VV63 1379 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 SH3BP5LQ7L8J4 393 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 LACRTQ9GZZ8 138 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 AMPD3Q01432 767 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 KIAA0895Q8NCT3 520 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 JAKMIP2Q96AA8 810 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 RPGRIP1Q96KN7 1286 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 MMS19Q96T76 1030 aa18.85■□□□□ 0.61
LIN54-204ENST00000505397 BRCA1P38398 1863 aaKnown RBP18.84■□□□□ 0.61
LIN54-204ENST00000505397 COL2A1P02458 1487 aaPredicted RBP18.84■□□□□ 0.61
LIN54-204ENST00000505397 ESYT2A0FGR8 921 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 SPDYE2BA6NHP3 402 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 SPDYE6P0CI01 402 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 SNHG28P0DPA3 235 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 HNRNPH3P31942 346 aaKnown RBP18.84■□□□□ 0.61
LIN54-204ENST00000505397 CENPPQ6IPU0 288 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 IQCDQ96DY2 449 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 UBA5Q9GZZ9 404 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 ZNHIT6Q9NWK9 470 aaKnown RBP18.84■□□□□ 0.61
LIN54-204ENST00000505397 ANO9A1A5B4 782 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 SLURP2P0DP57 97 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 ASIC1P78348 528 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 CNNM4Q6P4Q7 775 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 PIGSQ96S52 555 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 CSRNP1Q96S65 589 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 NOC4LQ9BVI4 516 aaKnown RBP18.84■□□□□ 0.61
LIN54-204ENST00000505397 TAOK3Q9H2K8 898 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
LIN54-204ENST00000505397 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
LIN54-204ENST00000505397 TARSL2A2RTX5 802 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms