RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 R3HDMLQ9H3Y0 253 aa12.97□□□□□ -0.33
BRCA1-222ENST00000493919 ZFYVE28Q9HCC9 887 aa12.97□□□□□ -0.33
BRCA1-222ENST00000493919 E7EWF7 191 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 HSPA8P11142 646 aaKnown RBP12.96□□□□□ -0.33
BRCA1-222ENST00000493919 CTCFP49711 727 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-222ENST00000493919 CCNHP51946 323 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-222ENST00000493919 LBX1P52954 281 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 PABPC4Q13310 644 aaKnown RBP eCLIP12.96□□□□□ -0.33
BRCA1-222ENST00000493919 CLEC17AQ6ZS10 378 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 STOX1Q6ZVD7 989 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 KIAA1328Q86T90 577 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 IQCA1Q86XH1 822 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 CCDC65Q8IXS2 484 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 GIMAP1Q8WWP7 306 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 TANGO6Q9C0B7 1094 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 VCPKMTQ9H867 229 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
BRCA1-222ENST00000493919 IL17RBQ9NRM6 502 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 EXOC1Q9NV70 894 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 QPCTLQ9NXS2 382 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 NYAP2Q9P242 653 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 PNMA3Q9UL41 463 aa12.96□□□□□ -0.33
BRCA1-222ENST00000493919 TRIM64CA6NLI5 447 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 RTN2O75298 545 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 PYGBP11216 843 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 NECTIN1Q15223 517 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 KBTBD12Q3ZCT8 623 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 MYSM1Q5VVJ2 828 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 NCOA7Q8NI08 942 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 C12orf42Q96LP6 360 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 MAK16Q9BXY0 300 aaKnown RBP12.96□□□□□ -0.34
BRCA1-222ENST00000493919 ZSCAN16Q9H4T2 348 aaPredicted RBP12.96□□□□□ -0.34
BRCA1-222ENST00000493919 RPAP3Q9H6T3 665 aaPredicted RBP12.96□□□□□ -0.34
BRCA1-222ENST00000493919 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.34
BRCA1-222ENST00000493919 BIN2Q9UBW5 565 aaPredicted RBP12.96□□□□□ -0.34
BRCA1-222ENST00000493919 N6AMT1Q9Y5N5 214 aa12.96□□□□□ -0.34
BRCA1-222ENST00000493919 A0A1B0GUA9 196 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 RTN3O95197 1032 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-222ENST00000493919 CYP11B2P19099 503 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 OSBPP22059 807 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 CENPFP49454 3210 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 LPAR1Q92633 364 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 TRIM11Q96F44 468 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-222ENST00000493919 RBSNQ9H1K0 784 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 IFT122Q9HBG6 1241 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 TBC1D7Q9P0N9 293 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 KLHL42Q9P2K6 505 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 CPA4Q9UI42 421 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 MCM8Q9UJA3 840 aa12.95□□□□□ -0.34
BRCA1-222ENST00000493919 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-222ENST00000493919 TNKSO95271 1327 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 KIF2AO00139 706 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 FXNQ16595 210 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 RASGRP2Q7LDG7 609 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 LMNTD2Q8IXW0 634 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 ARL10Q8N8L6 244 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 FAM76AQ8TAV0 307 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 NUP88Q99567 741 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 SLC45A1Q9Y2W3 748 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L15C9J2P7 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L13C9JLJ4 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L11C9JVI0 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L18D6R9N7 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L22D6RA61 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L17D6RBQ6 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L19D6RCP7 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L20D6RJB6 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 F5H6K3 240 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 GOLGA6L19H0YKK7 550 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 WDR46O15213 610 aaKnown RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 OPA1O60313 960 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 NDUFB10O96000 172 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 KLRC3Q07444 240 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 USP17L24Q0WX57 530 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 EIF2B5Q13144 721 aaKnown RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 KIAA0753Q2KHM9 967 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 FAM83BQ5T0W9 1011 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 CHST3Q7LGC8 479 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 PDILTQ8N807 584 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 TRIML1Q8N9V2 468 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 C3orf20Q8ND61 904 aa12.94□□□□□ -0.34
BRCA1-222ENST00000493919 ENOX1Q8TC92 643 aaKnown RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 EZH1Q92800 747 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 ZSCAN10Q96SZ4 725 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 INO80BQ9C086 356 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-222ENST00000493919 HTTP42858 3142 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 EIF3CLB5ME19 914 aaKnown RBP12.93□□□□□ -0.34
BRCA1-222ENST00000493919 GPR25O00155 361 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 TLR2O60603 784 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 RPS6KA5O75582 802 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 FLOT1O75955 427 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms