RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 VPS72Q15906 364 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
CCNB3-208ENST00000493507 EEPD1Q7L9B9 569 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 USHBP1Q8N6Y0 703 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 CELF2-AS1Q8N7Q2 184 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 MICAL1Q8TDZ2 1067 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 UBXN4Q92575 508 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 BRF1Q92994 677 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 ST7Q9NRC1 585 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 SIRPGQ9P1W8 387 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 SUSD2Q9UGT4 822 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 PCDHA11Q9Y5I1 949 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 SHANK3Q9BYB0 1731 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 PEAK1Q9H792 1746 aa6.86□□□□□ -1.31
CCNB3-208ENST00000493507 TNS1Q9HBL0 1735 aaKnown RBP6.86□□□□□ -1.31
CCNB3-208ENST00000493507 BLMP54132 1417 aaPredicted RBP6.85□□□□□ -1.31
CCNB3-208ENST00000493507 ANKRD26Q9UPS8 1709 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 SRCAPQ6ZRS2 3230 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 CENPJQ9HC77 1338 aaPredicted RBP6.85□□□□□ -1.31
CCNB3-208ENST00000493507 EP400Q96L91 3159 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 MEIS1O00470 390 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 GJB6O95452 261 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 ENDOUP21128 410 aaKnown RBP6.85□□□□□ -1.31
CCNB3-208ENST00000493507 BMP8BP34820 402 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 KRT27Q7Z3Y8 459 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 FIBCD1Q8N539 461 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 RCC1LQ96I51 464 aaKnown RBP6.85□□□□□ -1.31
CCNB3-208ENST00000493507 FGD4Q96M96 766 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 EPN3Q9H201 632 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 POGKQ9P215 609 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 TCFL5Q9UL49 500 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 SUGT1Q9Y2Z0 365 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 LRRC37A3O60309 1634 aa6.85□□□□□ -1.31
CCNB3-208ENST00000493507 USP6P35125 1406 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 CPSF1Q10570 1443 aaKnown RBP6.84□□□□□ -1.31
CCNB3-208ENST00000493507 SBNO1A3KN83 1393 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 TONSLQ96HA7 1378 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 SBNO2Q9Y2G9 1366 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 CAMTA1Q9Y6Y1 1673 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 B2RBV5 119 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 SYPP08247 313 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 ZNF792Q3KQV3 632 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 ABI1Q8IZP0 508 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 CRACR2BQ8N4Y2 399 aaPredicted RBP6.84□□□□□ -1.31
CCNB3-208ENST00000493507 ALPK1Q96QP1 1244 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 TESK2Q96S53 571 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 CDK19Q9BWU1 502 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 NOL6Q9H6R4 1146 aaKnown RBP6.84□□□□□ -1.31
CCNB3-208ENST00000493507 MINPP1Q9UNW1 487 aa6.84□□□□□ -1.31
CCNB3-208ENST00000493507 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
CCNB3-208ENST00000493507 FAM208AQ9UK61 1670 aaKnown RBP6.84□□□□□ -1.32
CCNB3-208ENST00000493507 NOP56O00567 594 aaKnown RBP6.83□□□□□ -1.32
CCNB3-208ENST00000493507 SUSD5O60279 629 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 CTSKP43235 329 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 NOP2P46087 812 aaKnown RBP6.83□□□□□ -1.32
CCNB3-208ENST00000493507 TEKQ02763 1124 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 POMZP3Q6PJE2 187 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 ARHGEF39Q8N4T4 335 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 BVESQ8NE79 360 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 ADCY4Q8NFM4 1077 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 DNAJC2Q99543 621 aaKnown RBP6.83□□□□□ -1.32
CCNB3-208ENST00000493507 FOXP3Q9BZS1 431 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 MBNL3Q9NUK0 354 aaKnown RBP6.83□□□□□ -1.32
CCNB3-208ENST00000493507 SLAMF8Q9P0V8 285 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 SBF2Q86WG5 1849 aa6.83□□□□□ -1.32
CCNB3-208ENST00000493507 USP19O94966 1318 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 ACEP12821 1306 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 PARP4Q9UKK3 1724 aaKnown RBP6.82□□□□□ -1.32
CCNB3-208ENST00000493507 AGRPO00253 132 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 RNASE1P07998 156 aaKnown RBP6.82□□□□□ -1.32
CCNB3-208ENST00000493507 VAV1P15498 845 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 POU4F1Q01851 419 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 PPP2R5DQ14738 602 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 R3HDM1Q15032 1099 aaKnown RBP6.82□□□□□ -1.32
CCNB3-208ENST00000493507 EZH2Q15910 746 aaKnown RBP6.82□□□□□ -1.32
CCNB3-208ENST00000493507 SV2CQ496J9 727 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 MRM1Q6IN84 353 aaKnown RBP6.82□□□□□ -1.32
CCNB3-208ENST00000493507 CRTC3Q6UUV7 619 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 ZDHHC15Q96MV8 337 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 CCDC113Q9H0I3 377 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 PRDM7Q9NQW5 492 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 CGGBP1Q9UFW8 167 aaPredicted RBP6.82□□□□□ -1.32
CCNB3-208ENST00000493507 AKT3Q9Y243 479 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 USP47Q96K76 1375 aa6.82□□□□□ -1.32
CCNB3-208ENST00000493507 H0Y8X5 98 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 ZNF205O95201 554 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 RPL10P27635 214 aaKnown RBP6.81□□□□□ -1.32
CCNB3-208ENST00000493507 DUSP4Q13115 394 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 GRB10Q13322 594 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 SERINC3Q13530 473 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 LRP10Q7Z4F1 713 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 ZNF513Q8N8E2 541 aaPredicted RBP6.81□□□□□ -1.32
CCNB3-208ENST00000493507 ST13P5Q8NFI4 369 aaPredicted RBP6.81□□□□□ -1.32
CCNB3-208ENST00000493507 MKL1Q969V6 931 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 PPP1R14AQ96A00 147 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 RC3H2Q9HBD1 1191 aaKnown RBP6.81□□□□□ -1.32
CCNB3-208ENST00000493507 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 APEX2Q9UBZ4 518 aa6.81□□□□□ -1.32
CCNB3-208ENST00000493507 TMEM59LQ9UK28 342 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms