RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 MSL3Q8N5Y2 521 aaKnown RBP10.89□□□□□ -0.67
MCF2L-227ENST00000486806 ERO1AQ96HE7 468 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 INPP4AQ96PE3 977 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-227ENST00000486806 NAP1L4Q99733 375 aaKnown RBP10.89□□□□□ -0.67
MCF2L-227ENST00000486806 RTEL1Q9NZ71 1219 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 UBIAD1Q9Y5Z9 338 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 DDX49Q9Y6V7 483 aaKnown RBP10.89□□□□□ -0.67
MCF2L-227ENST00000486806 SYNGAP1Q96PV0 1343 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 ASB14A6NK59 587 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 NEMFO60524 1076 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 CCNT1O60563 726 aaKnown RBP10.88□□□□□ -0.67
MCF2L-227ENST00000486806 RGS20O76081 388 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 YEATS4O95619 227 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 GNRH1P01148 92 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 XRCC5P13010 732 aaKnown RBP10.88□□□□□ -0.67
MCF2L-227ENST00000486806 KRT85P78386 507 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 SETQ01105 290 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-227ENST00000486806 SF3A1Q15459 793 aaKnown RBP10.88□□□□□ -0.67
MCF2L-227ENST00000486806 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-227ENST00000486806 CEP55Q53EZ4 464 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 ANO1Q5XXA6 986 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 OLFML2BQ68BL8 750 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-227ENST00000486806 ARMCX2Q7L311 632 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 NIPA1Q7RTP0 329 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 DPP9Q86TI2 863 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 C4orf32Q8N8J7 132 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 CYP2W1Q8TAV3 490 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 ETNPPLQ8TBG4 499 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 ZNF396Q96N95 335 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-227ENST00000486806 KATNBL1Q9H079 304 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 KCNMB3Q9NPA1 279 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 SLC5A4Q9NY91 659 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 FLRT1Q9NZU1 646 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 SRRDQ9UH36 339 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 DDX25Q9UHL0 483 aaKnown RBP10.88□□□□□ -0.67
MCF2L-227ENST00000486806 GABRQQ9UN88 632 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 CLIC4Q9Y696 253 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 MYH15Q9Y2K3 1946 aa10.88□□□□□ -0.67
MCF2L-227ENST00000486806 MGAMO43451 1857 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 B4DLN1 442 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 MEIS1O00470 390 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 BAG4O95429 457 aaKnown RBP10.87□□□□□ -0.67
MCF2L-227ENST00000486806 BMP15O95972 392 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 MYCLP12524 364 aaPredicted RBP10.87□□□□□ -0.67
MCF2L-227ENST00000486806 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 CYP2B6P20813 491 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 MCM7P33993 719 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 FLT3LGP49771 235 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 ATP2C1P98194 919 aaPredicted RBP10.87□□□□□ -0.67
MCF2L-227ENST00000486806 PDE4DQ08499 809 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 SEMA3FQ13275 785 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 IRF5Q13568 498 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 ZNF174Q15697 407 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 STXBP2Q15833 593 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 CCL14Q16627 93 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 PRR16Q569H4 304 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 LINC00301Q8NCQ3 95 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 GPRASP2Q96D09 838 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 MTMR9Q96QG7 549 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 MPHOSPH6Q99547 160 aaKnown RBP10.87□□□□□ -0.67
MCF2L-227ENST00000486806 MXRA8Q9BRK3 442 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 TINF2Q9BSI4 451 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 TMEM60Q9H2L4 133 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 JADE2Q9NQC1 790 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 CFAP45Q9UL16 551 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 CNPY2Q9Y2B0 182 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 HTTP42858 3142 aa10.87□□□□□ -0.67
MCF2L-227ENST00000486806 LAD1O00515 517 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 EIF3JO75822 258 aaKnown RBP10.86□□□□□ -0.67
MCF2L-227ENST00000486806 SNAI1O95863 264 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-227ENST00000486806 HSPA8P11142 646 aaKnown RBP10.86□□□□□ -0.67
MCF2L-227ENST00000486806 ICAM3P32942 547 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 MTMR1Q13613 665 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 SLC39A14Q15043 492 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 FBXO16Q8IX29 292 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-227ENST00000486806 TMEM87AQ8NBN3 555 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 LEO1Q8WVC0 666 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-227ENST00000486806 HAS1Q92839 578 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-227ENST00000486806 WDR11Q9BZH6 1224 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-227ENST00000486806 TFIP11Q9UBB9 837 aaKnown RBP10.86□□□□□ -0.67
MCF2L-227ENST00000486806 CEP131Q9UPN4 1083 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 MRVI1Q9Y6F6 885 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 MYH7BA7E2Y1 1941 aa10.86□□□□□ -0.67
MCF2L-227ENST00000486806 ELP1O95163 1332 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 CASP8AP2Q9UKL3 1982 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 TBX3O15119 743 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 FOXN1O15353 648 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 MSH4O15457 936 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 FIBPO43427 364 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 PPP6R2O75170 966 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 OR52Z1P0C646 297 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 HSPA1AP0DMV8 641 aaKnown RBP10.85□□□□□ -0.67
MCF2L-227ENST00000486806 HSPA1BP0DMV9 641 aaKnown RBP10.85□□□□□ -0.67
MCF2L-227ENST00000486806 ARP10275 920 aa10.85□□□□□ -0.67
MCF2L-227ENST00000486806 NCLP19338 710 aaKnown RBP10.85□□□□□ -0.67
MCF2L-227ENST00000486806 HOXD10P28358 340 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms