RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TAAR1Q96RJ0 339 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 APBA2Q99767 749 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 KATNBL1Q9H079 304 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 VPS54Q9P1Q0 977 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 ORC3Q9UBD5 711 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-204ENST00000474665 SEC63Q9UGP8 760 aaKnown RBP8.05□□□□□ -1.12
LIMD1-204ENST00000474665 PNMA2Q9UL42 364 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 MRPL11Q9Y3B7 192 aaKnown RBP8.05□□□□□ -1.12
LIMD1-204ENST00000474665 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 ESYT2A0FGR8 921 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 M0R2N6 131 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 PIK3CDO00329 1044 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 DEXIO95424 95 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 CFBP00751 764 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 IGFBP4P22692 258 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 EDNRBP24530 442 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 CALML3P27482 149 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 CYP2C19P33261 490 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 RGS2P41220 211 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 MCM2P49736 904 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 KCTD2Q14681 263 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 UBE2SQ16763 222 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 MAP3K21Q5TCX8 1036 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 MAMDC4Q6UXC1 1216 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 RNF207Q6ZRF8 634 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 IL31RAQ8NI17 732 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 MORC4Q8TE76 937 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 RNPC3Q96LT9 517 aaKnown RBP8.04□□□□□ -1.12
LIMD1-204ENST00000474665 LLPHQ9BRT6 129 aaKnown RBP8.04□□□□□ -1.12
LIMD1-204ENST00000474665 ZMYND12Q9H0C1 365 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 PSTPIP2Q9H939 334 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 RIC8AQ9NPQ8 531 aa8.04□□□□□ -1.12
LIMD1-204ENST00000474665 CXXC1Q9P0U4 656 aaPredicted RBP8.04□□□□□ -1.12
LIMD1-204ENST00000474665 DIS3Q9Y2L1 958 aaKnown RBP8.04□□□□□ -1.12
LIMD1-204ENST00000474665 SMCO2A6NFE2 343 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 GCOM1H8Y6P7 765 aaPredicted RBP8.03□□□□□ -1.12
LIMD1-204ENST00000474665 hCG_1984214I3L0E3 225 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 CDKL5O76039 1030 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 POLR2MP0CAP2 368 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 PRKAR2AP13861 404 aaKnown RBP8.03□□□□□ -1.12
LIMD1-204ENST00000474665 CLK2P49760 499 aaKnown RBP8.03□□□□□ -1.12
LIMD1-204ENST00000474665 EPHB4P54760 987 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 NAPAP54920 295 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 RTP1P59025 263 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 PRAMEF19Q5SWL8 479 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 OLFML2BQ68BL8 750 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 LHX8Q68G74 356 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 PPP1R18Q6NYC8 613 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 ZNF467Q7Z7K2 595 aaPredicted RBP8.03□□□□□ -1.12
LIMD1-204ENST00000474665 DPP9Q86TI2 863 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 MCF2L2Q86YR7 1114 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 ZNF713Q8N859 430 aaPredicted RBP8.03□□□□□ -1.12
LIMD1-204ENST00000474665 RASGRP4Q8TDF6 673 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 OXER1Q8TDS5 423 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 PHOX2BQ99453 314 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 TINF2Q9BSI4 451 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 MAF1Q9H063 256 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 PRDM5Q9NQX1 630 aaPredicted RBP8.03□□□□□ -1.12
LIMD1-204ENST00000474665 SH3GLB2Q9NR46 395 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 TMEM260Q9NX78 707 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 KCNJ14Q9UNX9 436 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 ATP11BQ9Y2G3 1177 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 FRMPD4Q14CM0 1322 aa8.03□□□□□ -1.12
LIMD1-204ENST00000474665 DOCK5Q9H7D0 1870 aa8.02□□□□□ -1.12
LIMD1-204ENST00000474665 LTBP2Q14767 1821 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 K7ELQ4 463 aaPredicted RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 ADCY6O43306 1168 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 RGS20O76081 388 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 ZNF865P0CJ78 1059 aaPredicted RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 CYBAP13498 195 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 PTGS1P23219 599 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 ALDH5A1P51649 535 aaPredicted RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 FOSBP53539 338 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 FOXK2Q01167 660 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 AKAP17AQ02040 695 aaKnown RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 CACNB2Q08289 660 aaPredicted RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 EARS2Q5JPH6 523 aaKnown RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 TMEM63BQ5T3F8 832 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 CPLX2Q6PUV4 134 aaKnown RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 ARMCX2Q7L311 632 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 FCHSD1Q86WN1 690 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 SAMD3Q8N6K7 520 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 CRYGNQ8WXF5 182 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 TNFRSF25Q93038 417 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 TIFAQ96CG3 184 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 ZFP91Q96JP5 570 aaPredicted RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 PGBD1Q96JS3 809 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 UIMC1Q96RL1 719 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 RMDN3Q96TC7 470 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 ALG1Q9BT22 464 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 PHF20Q9BVI0 1012 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 CWC22Q9HCG8 908 aaKnown RBP8.02□□□□□ -1.13
LIMD1-204ENST00000474665 PXMP2Q9NR77 195 aa8.02□□□□□ -1.13
LIMD1-204ENST00000474665 FRMPD3Q5JV73 1810 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-204ENST00000474665 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-204ENST00000474665 FAM205CA6NFA0 338 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms