RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 PHKBQ93100 1093 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 VTA1Q9NP79 307 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 EYSQ5T1H1 3165 aa17.02■□□□□ 0.31
COL16A1-208ENST00000468459 LOC102724159A0A0B4J2E5 919 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 PFKFB2O60825 505 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 CD4P01730 458 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 SMARCA1P28370 1054 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 ALDH5A1P51649 535 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-208ENST00000468459 FPGSQ05932 587 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
COL16A1-208ENST00000468459 FSCN1Q16658 493 aaKnown RBP17.01■□□□□ 0.31
COL16A1-208ENST00000468459 MFSD5Q6N075 450 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 CXCL17Q6UXB2 119 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 SLC30A10Q6XR72 485 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 C16orf59Q7L2K0 433 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 GPKOWQ92917 476 aaPredicted RBP eCLIP17.01■□□□□ 0.31
COL16A1-208ENST00000468459 AMNQ9BXJ7 453 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 SLKQ9H2G2 1235 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-208ENST00000468459 PNMA2Q9UL42 364 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 PCDHA1Q9Y5I3 950 aa17.01■□□□□ 0.31
COL16A1-208ENST00000468459 CCDC196A0A1B0GTZ2 297 aa17■□□□□ 0.31
COL16A1-208ENST00000468459 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
COL16A1-208ENST00000468459 OPLAHO14841 1288 aa17■□□□□ 0.31
COL16A1-208ENST00000468459 DYNC1LI2O43237 492 aaPredicted RBP17■□□□□ 0.31
COL16A1-208ENST00000468459 EDNRBP24530 442 aa17■□□□□ 0.31
COL16A1-208ENST00000468459 TBC1D5Q92609 795 aa17■□□□□ 0.31
COL16A1-208ENST00000468459 FAM161BQ96MY7 647 aa17■□□□□ 0.31
COL16A1-208ENST00000468459 TTYH1Q9H313 450 aaPredicted RBP17■□□□□ 0.31
COL16A1-208ENST00000468459 SEMA6BQ9H3T3 888 aa17■□□□□ 0.31
COL16A1-208ENST00000468459 ADD3Q9UEY8 706 aaKnown RBP17■□□□□ 0.31
COL16A1-208ENST00000468459 SEC63Q9UGP8 760 aaKnown RBP17■□□□□ 0.31
COL16A1-208ENST00000468459 V9GY48 417 aaPredicted RBP17■□□□□ 0.31
COL16A1-208ENST00000468459 ABCB11O95342 1321 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 CABYRO75952 493 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 IFNAR1P17181 557 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 RPS6P62753 249 aaKnown RBP16.99■□□□□ 0.31
COL16A1-208ENST00000468459 PPP2R5BQ15173 497 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 DUSP28Q4G0W2 176 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 ZNF697Q5TEC3 545 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 WWC2Q6AWC2 1192 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 HEATR3Q7Z4Q2 680 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 GTF3C6Q969F1 213 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 VTI1AQ96AJ9 217 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 RNPC3Q96LT9 517 aaKnown RBP16.99■□□□□ 0.31
COL16A1-208ENST00000468459 SLC26A6Q9BXS9 759 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 LIMCH1Q9UPQ0 1083 aa16.99■□□□□ 0.31
COL16A1-208ENST00000468459 MYH6P13533 1939 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 PTPDC1A2A3K4 754 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 CPLX1O14810 134 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 CTDNEP1O95476 244 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 RASIP1Q5U651 963 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 TYW1BQ6NUM6 668 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 RNF207Q6ZRF8 634 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.98■□□□□ 0.316e-8■■■□□ 18.2
COL16A1-208ENST00000468459 AP5M1Q9H0R1 490 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 MRPL11Q9Y3B7 192 aaKnown RBP16.98■□□□□ 0.31
COL16A1-208ENST00000468459 MCM3APO60318 1980 aa16.98■□□□□ 0.31
COL16A1-208ENST00000468459 ST18O60284 1047 aa16.97■□□□□ 0.31
COL16A1-208ENST00000468459 CALML3P27482 149 aa16.97■□□□□ 0.31
COL16A1-208ENST00000468459 ITGA7Q13683 1181 aa16.97■□□□□ 0.31
COL16A1-208ENST00000468459 PKN1Q16512 942 aa16.97■□□□□ 0.31
COL16A1-208ENST00000468459 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
COL16A1-208ENST00000468459 CDX2Q99626 313 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-208ENST00000468459 LCTP09848 1927 aa16.96■□□□□ 0.31
COL16A1-208ENST00000468459 PRPF3O43395 683 aaKnown RBP16.96■□□□□ 0.31
COL16A1-208ENST00000468459 JAK2O60674 1132 aa16.96■□□□□ 0.31
COL16A1-208ENST00000468459 CSF2RAP15509 400 aa16.96■□□□□ 0.31
COL16A1-208ENST00000468459 TMEM240Q5SV17 173 aa16.96■□□□□ 0.31
COL16A1-208ENST00000468459 DNERQ8NFT8 737 aa16.96■□□□□ 0.31
COL16A1-208ENST00000468459 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-208ENST00000468459 SEZ6LQ9BYH1 1024 aa16.96■□□□□ 0.31
COL16A1-208ENST00000468459 WDR11Q9BZH6 1224 aa16.96■□□□□ 0.31
COL16A1-208ENST00000468459 COL20A1Q9P218 1284 aa16.96■□□□□ 0.31
COL16A1-208ENST00000468459 TMEM265A0A087WTH1 108 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-208ENST00000468459 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-208ENST00000468459 STXBP3O00186 592 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 TLR3O15455 904 aaKnown RBP16.95■□□□□ 0.3
COL16A1-208ENST00000468459 ZEB2O60315 1214 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 CFBP00751 764 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 SCG2P13521 617 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 HOXA13P31271 388 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-208ENST00000468459 PSMC6P62333 389 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 SSRP1Q08945 709 aaKnown RBP16.95■□□□□ 0.3
COL16A1-208ENST00000468459 PPIGQ13427 754 aaKnown RBP eCLIP16.95■□□□□ 0.35e-7■■■■■ 45.7
COL16A1-208ENST00000468459 PFKFB3Q16875 520 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-208ENST00000468459 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
COL16A1-208ENST00000468459 AIFM3Q96NN9 605 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 PPP1R12CQ9BZL4 782 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 MAF1Q9H063 256 aa16.95■□□□□ 0.3
COL16A1-208ENST00000468459 PRUNE2Q8WUY3 3088 aa16.94■□□□□ 0.3
COL16A1-208ENST00000468459 LRRC37A2A6NM11 1700 aa16.94■□□□□ 0.3
COL16A1-208ENST00000468459 B4GALT4O60513 344 aa16.94■□□□□ 0.3
COL16A1-208ENST00000468459 CYP2C18P33260 490 aa16.94■□□□□ 0.3
COL16A1-208ENST00000468459 NAPAP54920 295 aa16.94■□□□□ 0.3
COL16A1-208ENST00000468459 PURAQ00577 322 aaKnown RBP16.94■□□□□ 0.3
COL16A1-208ENST00000468459 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
COL16A1-208ENST00000468459 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
COL16A1-208ENST00000468459 TMEM199Q8N511 208 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms