RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ANTXR1Q9H6X2 564 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 BSDC1Q9NW68 430 aaPredicted RBP9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 SNTG2Q9NY99 539 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 KCNK4Q9NYG8 393 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 POLLQ9UGP5 575 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 MINPP1Q9UNW1 487 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 MSRB2Q9Y3D2 182 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 R3HCC1Q9Y3T6 440 aaKnown RBP9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 CORINQ9Y5Q5 1042 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 LRRFIP2Q9Y608 721 aaKnown RBP9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 MEIS3P2A8K0S8 358 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 UBTFL1P0CB47 393 aaPredicted RBP9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 AMPD1P23109 780 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 CYFIP1Q7L576 1253 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 KLHDC4Q8TBB5 520 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 MRFAP1L1Q96HT8 127 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 CDC5LQ99459 802 aaKnown RBP9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 PUS3Q9BZE2 481 aaKnown RBP9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 TNKS2Q9H2K2 1166 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 ACTR10Q9NZ32 417 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 RNF181Q9P0P0 153 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 TACC3Q9Y6A5 838 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 CHD4Q14839 1912 aa9.95□□□□□ -0.82
ECHDC1-212ENST00000461239 ANKRD18BA2A2Z9 1011 aa9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 SNAP23O00161 211 aa9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 YY1P25490 414 aa9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 CD68P34810 354 aaPredicted RBP9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 HDXQ7Z353 690 aa9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 ITPRIPQ8IWB1 547 aa9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 FTSJ3Q8IY81 847 aaKnown RBP9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 DTWD1Q8N5C7 304 aa9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 WHAMMQ8TF30 809 aa9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 GPR101Q96P66 508 aaPredicted RBP9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 SRPK1Q96SB4 655 aaKnown RBP9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 WDR18Q9BV38 432 aa9.94□□□□□ -0.82
ECHDC1-212ENST00000461239 IRS2Q9Y4H2 1338 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 FAM221BA6H8Z2 402 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 GNAI3P08754 354 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 IARSP41252 1262 aaKnown RBP9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 MTX1Q13505 466 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 MVPQ14764 893 aaKnown RBP9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 DDR2Q16832 855 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 LRRC24Q50LG9 513 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 ZC3H12AQ5D1E8 599 aaKnown RBP9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 SDE2Q6IQ49 451 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 DPP8Q6V1X1 898 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 RUFY4Q6ZNE9 571 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 TBC1D16Q8TBP0 767 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 DEPDC7Q96QD5 511 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 RIPOR2Q9Y4F9 1068 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 CCDC88AQ3V6T2 1871 aa9.93□□□□□ -0.82
ECHDC1-212ENST00000461239 SYNGAP1Q96PV0 1343 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 SPEF2Q9C093 1822 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 PNMA6EA0A0J9YXQ4 647 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 DCDC2CA8MYV0 355 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 AOC2O75106 756 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 GMPRP36959 345 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 IGHMBP2P38935 993 aaKnown RBP9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 RRP1P56182 461 aaKnown RBP9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 RING1Q06587 406 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 CHRNDQ07001 517 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 AOC3Q16853 763 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 CCDC57Q2TAC2 916 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 HP1BP3Q5SSJ5 553 aaPredicted RBP9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 TXNRD3Q86VQ6 643 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 C19orf47Q8N9M1 422 aaKnown RBP9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 TMEM40Q8WWA1 233 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 ELMO3Q96BJ8 720 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 REV1Q9UBZ9 1251 aa9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 PA2G4Q9UQ80 394 aaKnown RBP9.92□□□□□ -0.82
ECHDC1-212ENST00000461239 YDJCA8MPS7 323 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 FZD9O00144 591 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 DNAJA2O60884 412 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 TAF5LO75529 589 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 GNAI2P04899 355 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 KLRK1P26718 216 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 KIAA2012Q0VF49 1180 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 LRRFIP1Q32MZ4 808 aaKnown RBP9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 LDHAL6AQ6ZMR3 332 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 ATG9AQ7Z3C6 839 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 VGLL2Q8N8G2 317 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 UBASH3BQ8TF42 649 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 MPHOSPH8Q99549 860 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 ZBTB40Q9NUA8 1239 aa9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 DICER1Q9UPY3 1922 aaKnown RBP9.91□□□□□ -0.82
ECHDC1-212ENST00000461239 XDHP47989 1333 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 ZNF541Q9H0D2 1346 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 PPIP5K2O43314 1243 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 UFL1O94874 794 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 ATP8B2P98198 1209 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 TMEM201Q5SNT2 666 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 C12orf40Q86WS4 652 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 SIRT2Q8IXJ6 389 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 MICAL1Q8TDZ2 1067 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 TM9SF2Q99805 663 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 CCDC113Q9H0I3 377 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 VPS33BQ9H267 617 aa9.9□□□□□ -0.82
ECHDC1-212ENST00000461239 A0A1B0GUL6 1792 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms