RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DUSP9Q99956 384 aaKnown RBP13.16□□□□□ -0.3
VTA1-203ENST00000452973 FBXO28Q9NVF7 368 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 ZNF215Q9UL58 517 aaPredicted RBP13.16□□□□□ -0.3
VTA1-203ENST00000452973 CNTNAP1P78357 1384 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 NPHP3-ACAD11A0A0J9YXS1 232 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 MEIS1O00470 390 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 WNT10BO00744 389 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
VTA1-203ENST00000452973 CCP110O43303 1012 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 MTIF2P46199 727 aaKnown RBP13.16□□□□□ -0.3
VTA1-203ENST00000452973 KCNJ6P48051 423 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 DHTKD1Q96HY7 919 aaPredicted RBP13.16□□□□□ -0.3
VTA1-203ENST00000452973 KCND1Q9NSA2 647 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 SMCHD1A6NHR9 2005 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
VTA1-203ENST00000452973 A0A0U1RQJ8 604 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 LRRC10BA6NIK2 292 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 EGFRP00533 1210 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 CCNE1P24864 410 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 RAD9BQ6WBX8 426 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 ATRIPQ8WXE1 791 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 FEZ1Q99689 392 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 GLT8D2Q9H1C3 349 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 POLD4Q9HCU8 107 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 KIF2AO00139 706 aaPredicted RBP13.15□□□□□ -0.3
VTA1-203ENST00000452973 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 KRT9P35527 623 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 GNG11P61952 73 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 ETF1P62495 437 aaKnown RBP13.15□□□□□ -0.3
VTA1-203ENST00000452973 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
VTA1-203ENST00000452973 CNOT6LQ96LI5 555 aaKnown RBP13.15□□□□□ -0.3
VTA1-203ENST00000452973 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.3
VTA1-203ENST00000452973 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■□□□□ 10
VTA1-203ENST00000452973 KRT18P05783 430 aaKnown RBP13.14□□□□□ -0.31
VTA1-203ENST00000452973 USP11P51784 963 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 UNC13DQ70J99 1090 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 CNGA4Q8IV77 575 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 PANX2Q96RD6 677 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 SEMA6BQ9H3T3 888 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 BICDL2A1A5D9 508 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 OPLAHO14841 1288 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 URI1O94763 535 aaPredicted RBP13.14□□□□□ -0.31
VTA1-203ENST00000452973 KLK7P49862 253 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 DALRD3Q5D0E6 543 aaKnown RBP13.14□□□□□ -0.31
VTA1-203ENST00000452973 CIAPIN1Q6FI81 312 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 THAP9Q9H5L6 903 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 AP3B2Q13367 1082 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 DGKZQ13574 1117 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 GPIHBP1Q8IV16 184 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 MB21D1Q8N884 522 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 MRPL44Q9H9J2 332 aaKnown RBP13.14□□□□□ -0.31
VTA1-203ENST00000452973 MYOZ2Q9NPC6 264 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
VTA1-203ENST00000452973 MED24O75448 989 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
VTA1-203ENST00000452973 TBC1D8BQ0IIM8 1120 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 TRIM65Q6PJ69 517 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 NOC4LQ9BVI4 516 aaKnown RBP13.13□□□□□ -0.31
VTA1-203ENST00000452973 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
VTA1-203ENST00000452973 ABHD10Q9NUJ1 306 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 TTC26A0AVF1 554 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 CTIFO43310 598 aaKnown RBP13.13□□□□□ -0.31
VTA1-203ENST00000452973 CHMP2AO43633 222 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 CCDC175P0C221 793 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 NCBP1Q09161 790 aaKnown RBP13.13□□□□□ -0.31
VTA1-203ENST00000452973 RASA3Q14644 834 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 TMEM119Q4V9L6 283 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 GPBP1Q86WP2 473 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 NELFCDQ8IXH7 590 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 WDR24Q96S15 920 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 KCNMB3Q9NPA1 279 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 PANK4Q9NVE7 773 aa13.13□□□□□ -0.31
VTA1-203ENST00000452973 LGALS16A8MUM7 142 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 FANCGO15287 622 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 PLA2G4BP0C869 781 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
VTA1-203ENST00000452973 CAP2P40123 477 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 PSMC6P62333 389 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 PABPC4Q13310 644 aaKnown RBP eCLIP13.12□□□□□ -0.31
VTA1-203ENST00000452973 SAMD7Q7Z3H4 446 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 ACRBPQ8NEB7 543 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 AGBL3Q8NEM8 1001 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
VTA1-203ENST00000452973 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
VTA1-203ENST00000452973 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
VTA1-203ENST00000452973 SLFN12Q8IYM2 578 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
VTA1-203ENST00000452973 SLC16A10Q8TF71 515 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms