RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 ZNF540Q8NDQ6 660 aa6.19□□□□□ -1.42
FAM60A-202ENST00000448582 UTP15Q8TED0 518 aaKnown RBP6.19□□□□□ -1.42
FAM60A-202ENST00000448582 HERPUD2Q9BSE4 406 aa6.19□□□□□ -1.42
FAM60A-202ENST00000448582 TEX13AQ9BXU3 409 aaPredicted RBP6.19□□□□□ -1.42
FAM60A-202ENST00000448582 CLIP2Q9UDT6 1046 aa6.19□□□□□ -1.42
FAM60A-202ENST00000448582 RRP7AQ9Y3A4 280 aaKnown RBP6.19□□□□□ -1.42
FAM60A-202ENST00000448582 PTCH2Q9Y6C5 1203 aa6.19□□□□□ -1.42
FAM60A-202ENST00000448582 KRBA1A5PL33 1030 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 KIF3CO14782 793 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MTSS1O43312 755 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MT-ND3P03897 115 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MTHFRP42898 656 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MRPS5P82675 430 aaKnown RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 FUT2Q10981 343 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 SGCGQ13326 291 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MUM1Q2TAK8 710 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 KLHL40Q2TBA0 621 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 TBC1D25Q3MII6 688 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 STXBP5Q5T5C0 1151 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 WWC2Q6AWC2 1192 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 ASTLQ6HA08 431 aaPredicted RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 NCAPG2Q86XI2 1143 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 SLC41A1Q8IVJ1 513 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 PDCD7Q8N8D1 485 aaKnown RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 SLC16A10Q8TF71 515 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MMTAG2Q9BU76 263 aaKnown RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 TMEM121BQ9BXQ6 578 aaPredicted RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 RSAD1Q9HA92 442 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 PGAP2Q9UHJ9 254 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 PPT2Q9UMR5 302 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 R3HCC1Q9Y3T6 440 aaKnown RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 COL3A1P02461 1466 aaPredicted RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 SLC12A8A0AV02 714 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 PPP1R12BO60237 982 aaPredicted RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 XPAP23025 273 aaPredicted RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 CNTFP26441 200 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 TNNT3P45378 269 aaPredicted RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 TUBP50607 506 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 IRX1P78414 480 aaPredicted RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MPP1Q00013 466 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 DEUP1Q05D60 604 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 LAPTM5Q13571 262 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MMEL1Q495T6 779 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 IER5LQ5T953 404 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 GAS2L3Q86XJ1 694 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 TBC1D21Q8IYX1 336 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 ARHGEF2Q92974 986 aaKnown RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 GMCL1Q96IK5 515 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 MTRQ99707 1265 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 ELAC2Q9BQ52 826 aaKnown RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 NAA15Q9BXJ9 866 aaKnown RBP6.18□□□□□ -1.42
FAM60A-202ENST00000448582 PDP2Q9P2J9 529 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 ADAMTS1Q9UHI8 967 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 ZKSCAN5Q9Y2L8 839 aa6.18□□□□□ -1.42
FAM60A-202ENST00000448582 A6NNZ2 444 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 PRPF40AO75400 957 aaKnown RBP6.17□□□□□ -1.42
FAM60A-202ENST00000448582 DGKIO75912 1065 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 CPP00450 1065 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 ZSCAN22P10073 491 aaPredicted RBP6.17□□□□□ -1.42
FAM60A-202ENST00000448582 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 SP140Q13342 867 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 FKBP5Q13451 457 aaPredicted RBP6.17□□□□□ -1.42
FAM60A-202ENST00000448582 HOMER1Q86YM7 354 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 RAB11FIP4Q86YS3 637 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 TCEAL8Q8IYN2 117 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 MNS1Q8NEH6 495 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 FBXO27Q8NI29 283 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 PANK1Q8TE04 598 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 SGCDQ92629 289 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 ABHD8Q96I13 439 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 RBM14Q96PK6 669 aaKnown RBP6.17□□□□□ -1.42
FAM60A-202ENST00000448582 FAM184BQ9ULE4 1060 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 CDC42BPGQ6DT37 1551 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 CYP17A1P05093 508 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 HMGB2P26583 209 aaKnown RBP6.17□□□□□ -1.42
FAM60A-202ENST00000448582 GUCY1B3Q02153 619 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 NR6A1Q15406 480 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 RSBN1LQ6PCB5 846 aaPredicted RBP6.17□□□□□ -1.42
FAM60A-202ENST00000448582 ANKMY2Q8IV38 441 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 RPAP2Q8IXW5 612 aaPredicted RBP6.17□□□□□ -1.42
FAM60A-202ENST00000448582 CHST13Q8NET6 341 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 MOGAT1Q96PD6 335 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 WDR24Q96S15 920 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 ZNF700Q9H0M5 742 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 TAOK3Q9H2K8 898 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 HOMER3Q9NSC5 361 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 CCDC39Q9UFE4 941 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 PNMA8BQ9ULN7 279 aaPredicted RBP6.17□□□□□ -1.42
FAM60A-202ENST00000448582 PCDHGB6Q9Y5F9 930 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 TMEM2Q9UHN6 1383 aa6.17□□□□□ -1.42
FAM60A-202ENST00000448582 KIF2AO00139 706 aaPredicted RBP6.16□□□□□ -1.42
FAM60A-202ENST00000448582 PCP11498 1178 aaKnown RBP6.16□□□□□ -1.42
FAM60A-202ENST00000448582 INPP5BP32019 993 aa6.16□□□□□ -1.42
FAM60A-202ENST00000448582 YARSP54577 528 aaKnown RBP6.16□□□□□ -1.42
FAM60A-202ENST00000448582 EVX2Q03828 476 aa6.16□□□□□ -1.42
FAM60A-202ENST00000448582 DMPKQ09013 629 aa6.16□□□□□ -1.42
FAM60A-202ENST00000448582 SLC14A2Q15849 920 aa6.16□□□□□ -1.42
FAM60A-202ENST00000448582 HEATR6Q6AI08 1181 aaKnown RBP6.16□□□□□ -1.42
FAM60A-202ENST00000448582 MZT2BQ6NZ67 158 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms