RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PRAMEF13Q5VWM6 474 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 XRRA1Q6P2D8 792 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 STK11IPQ8N1F8 1099 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 RNF214Q8ND24 703 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 ELOA3Q8NG57 546 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 XAGE3Q8WTP9 111 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 NUDT8Q8WV74 236 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 KLHDC7BQ96G42 594 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 ZDHHC15Q96MV8 337 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 MYD88Q99836 296 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 PLCD4Q9BRC7 762 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 MTA3Q9BTC8 594 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 SLC12A5Q9H2X9 1139 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 GOLGA2P5Q9HBQ8 144 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 PRDM6Q9NQX0 595 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 ZNF652Q9Y2D9 606 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 DIS3Q9Y2L1 958 aaKnown RBP4.73□□□□□ -1.65
PMS1-216ENST00000447734 GPR55Q9Y2T6 319 aaPredicted RBP4.73□□□□□ -1.65
PMS1-216ENST00000447734 COQ6Q9Y2Z9 468 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 PCDHB12Q9Y5F1 795 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 FHOD1Q9Y613 1164 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 ABHD14A-ACY1A0A1B0GW23 586 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 F5H423 210 aaPredicted RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 ARVCFO00192 962 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 TMPRSS2O15393 492 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 AP1G1O43747 822 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 HYAL3O43820 417 aaPredicted RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 OFD1O75665 1012 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 CST3P01034 146 aaPredicted RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 ALBP02768 609 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 SOD2P04179 222 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 NID1P14543 1247 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 RHCEP18577 417 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 NTF4P34130 210 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 SARSP49591 514 aaKnown RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 GPR85P60893 370 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 RHDQ02161 417 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 LRP8Q14114 963 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 SLC9A5Q14940 896 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 CLUL1Q15846 466 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 SLC4A8Q2Y0W8 1093 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 TMEM177Q53S58 311 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 RRP12Q5JTH9 1297 aaKnown RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 L1TD1Q5T7N2 865 aaKnown RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 CYB5RLQ6IPT4 315 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 CHST15Q7LFX5 561 aaPredicted RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 PPIL6Q8IXY8 311 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 FIBCD1Q8N539 461 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 KLHL23Q8NBE8 558 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 SLC35G2Q8TBE7 412 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 SYTL5Q8TDW5 730 aaPredicted RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 CDC5LQ99459 802 aaKnown RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 ZFYVE21Q9BQ24 234 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 PHF20Q9BVI0 1012 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 SELENOOQ9BVL4 669 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 INO80BQ9C086 356 aaPredicted RBP4.72□□□□□ -1.65
PMS1-216ENST00000447734 JADE2Q9NQC1 790 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 GTF2IRD1Q9UHL9 959 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 PTPN22Q9Y2R2 807 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 IPPQ9Y573 584 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 SYNGAP1Q96PV0 1343 aa4.72□□□□□ -1.65
PMS1-216ENST00000447734 PTPDC1A2A3K4 754 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 CFAP69A5D8W1 941 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 KLHL33A6NCF5 533 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 M0R082 166 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 PCDHGA12O60330 932 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 SRGAP2CP0DJJ0 459 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 TYRP1P17643 537 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 ITIH2P19823 946 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 CAP2P40123 477 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 IREB2P48200 963 aaKnown RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 USP14P54578 494 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 SCAND1P57086 179 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 HTRA3P83110 453 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 SCRN1Q12765 414 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 LRRC32Q14392 662 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 SLBPQ14493 270 aaKnown RBP eCLIP4.71□□□□□ -1.66
PMS1-216ENST00000447734 ACAP2Q15057 778 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 DPY19L1Q2PZI1 675 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 BROXQ5VW32 411 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 B3GNT9Q6UX72 402 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 RSPO2Q6UXX9 243 aaPredicted RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 SRGAP1Q7Z6B7 1085 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 NBPF11Q86T75 865 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 SKAP1Q86WV1 359 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 MYLK4Q86YV6 388 aaPredicted RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 GPATCH11Q8N954 259 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 ZNF417Q8TAU3 575 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 POF1BQ8WVV4 589 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 DIO2Q92813 273 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 TRMT2BQ96GJ1 504 aaKnown RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 TEKT5Q96M29 485 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 KREMEN1Q96MU8 473 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 TAAR9Q96RI9 348 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 ZNF587Q96SQ5 575 aaPredicted RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 ALG1Q9BT22 464 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 NAA15Q9BXJ9 866 aaKnown RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 CELF4Q9BZC1 486 aaKnown RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 RNF38Q9H0F5 515 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 ATXN3LQ9H3M9 355 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms