RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ARIH2O95376 493 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 MMP3P08254 477 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 ZP2Q05996 745 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 TIGD5Q53EQ6 642 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 FAM117BQ6P1L5 589 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 CCDC62Q6P9F0 684 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 AFG1LQ8WV93 481 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 PABPC5Q96DU9 382 aaKnown RBP11.79□□□□□ -0.52
SYN3-204ENST00000441821 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
SYN3-204ENST00000441821 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
SYN3-204ENST00000441821 CASTP20810 708 aaKnown RBP11.78□□□□□ -0.52
SYN3-204ENST00000441821 HTRA4P83105 476 aaPredicted RBP11.78□□□□□ -0.52
SYN3-204ENST00000441821 PTK7Q13308 1070 aa11.78□□□□□ -0.52
SYN3-204ENST00000441821 COL19A1Q14993 1142 aa11.78□□□□□ -0.52
SYN3-204ENST00000441821 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
SYN3-204ENST00000441821 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.78□□□□□ -0.52
SYN3-204ENST00000441821 ADHFE1Q8IWW8 467 aa11.78□□□□□ -0.52
SYN3-204ENST00000441821 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
SYN3-204ENST00000441821 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
SYN3-204ENST00000441821 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
SYN3-204ENST00000441821 MFSD14AQ96MC6 490 aa11.78□□□□□ -0.52
SYN3-204ENST00000441821 YTHDC1Q96MU7 727 aaKnown RBP11.78□□□□□ -0.52
SYN3-204ENST00000441821 SAMD11Q96NU1 681 aa11.78□□□□□ -0.52
SYN3-204ENST00000441821 SEC62Q99442 399 aaKnown RBP11.78□□□□□ -0.52
SYN3-204ENST00000441821 UPF3BQ9BZI7 483 aaKnown RBP11.78□□□□□ -0.52
SYN3-204ENST00000441821 H3BNC9 293 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 RANBP6O60518 1105 aaKnown RBP11.77□□□□□ -0.53
SYN3-204ENST00000441821 LGR5O75473 907 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 GH1P01241 217 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 AMHP03971 560 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 ARHGAP1Q07960 439 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
SYN3-204ENST00000441821 DGKDQ16760 1214 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 LY6KQ17RY6 165 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 TRIM71Q2Q1W2 868 aaKnown RBP11.77□□□□□ -0.53
SYN3-204ENST00000441821 EPC2Q52LR7 807 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 ZNF618Q5T7W0 954 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 HFE2Q6ZVN8 426 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 C7orf31Q8N865 590 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 RGS22Q8NE09 1264 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 KATNAL1Q9BW62 490 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 INCENPQ9NQS7 918 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 HDAC6Q9UBN7 1215 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 WDR19Q8NEZ3 1342 aa11.77□□□□□ -0.53
SYN3-204ENST00000441821 TOP1P11387 765 aaKnown RBP11.76□□□□□ -0.53
SYN3-204ENST00000441821 PSEN2P49810 448 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 MBTPS1Q14703 1052 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 TCEAL5Q5H9L2 206 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
SYN3-204ENST00000441821 MAF1Q9H063 256 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
SYN3-204ENST00000441821 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 ANAPC4Q9UJX5 808 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 FRMPD2Q68DX3 1309 aaPredicted RBP11.76□□□□□ -0.53
SYN3-204ENST00000441821 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
SYN3-204ENST00000441821 HAS3O00219 553 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 NCK2O43639 380 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 ORC4O43929 436 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 F2P00734 622 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 FGRP09769 529 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 IRS1P35568 1242 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 GPM6BQ13491 265 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 MFSD10Q14728 455 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 ZMYM1Q5SVZ6 1142 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 SEPT14Q6ZU15 432 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 CHST3Q7LGC8 479 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 MYOCDQ8IZQ8 938 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 DBF4BQ8NFT6 615 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 WNT8BQ93098 351 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 TMEM47Q9BQJ4 181 aa11.75□□□□□ -0.53
SYN3-204ENST00000441821 MYO15AQ9UKN7 3530 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 FOXP2O15409 715 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 PDHBP11177 359 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 LTBRP36941 435 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 ZNF543Q08ER8 600 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 SMAD2Q15796 467 aaKnown RBP11.74□□□□□ -0.53
SYN3-204ENST00000441821 STXBP2Q15833 593 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 KIAA0753Q2KHM9 967 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 CTC1Q2NKJ3 1217 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 PLEKHG4Q58EX7 1191 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 HERC4Q5GLZ8 1057 aaPredicted RBP11.74□□□□□ -0.53
SYN3-204ENST00000441821 EP400NLQ6ZTU2 488 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 TMEM192Q8IY95 271 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 NSUN6Q8TEA1 469 aaKnown RBP11.74□□□□□ -0.53
SYN3-204ENST00000441821 ANKS1AQ92625 1134 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 TOP1MTQ969P6 601 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 IWS1Q96ST2 819 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
SYN3-204ENST00000441821 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 TCP11L1Q9NUJ3 509 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 CLDND1Q9NY35 253 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 DDX41Q9UJV9 622 aaKnown RBP11.74□□□□□ -0.53
SYN3-204ENST00000441821 COL4A6Q14031 1691 aa11.74□□□□□ -0.53
SYN3-204ENST00000441821 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
SYN3-204ENST00000441821 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
SYN3-204ENST00000441821 SNHG28P0DPA3 235 aa11.73□□□□□ -0.53
SYN3-204ENST00000441821 ZNF200P98182 395 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms