RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
RPE-206ENST00000429921 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
RPE-206ENST00000429921 JDP2Q8WYK2 163 aa11.34□□□□□ -0.59
RPE-206ENST00000429921 DDX12PQ92771 950 aa11.34□□□□□ -0.59
RPE-206ENST00000429921 AK8Q96MA6 479 aa11.34□□□□□ -0.59
RPE-206ENST00000429921 MED24O75448 989 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 RHOBTB3O94955 611 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ABL1P00519 1130 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 INPP5BP32019 993 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ZNF76P36508 570 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ATRNL1Q5VV63 1379 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 PPFIBP1Q86W92 1011 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 AGBL1Q96MI9 1066 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ZNF341Q9BYN7 854 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 TAOK3Q9H2K8 898 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 DNAI1Q9UI46 699 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 TFR2Q9UP52 801 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ARFGEF1Q9Y6D6 1849 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 SPDYE3A6NKU9 549 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 AKR1B15C9JRZ8 316 aaPredicted RBP11.33□□□□□ -0.6
RPE-206ENST00000429921 hCG_1984214I3L0E3 225 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ZBTB39O15060 712 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 FANCGO15287 622 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 GYPCP04921 128 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 FXR2P51116 673 aaKnown RBP eCLIP11.33□□□□□ -0.6
RPE-206ENST00000429921 STAT2P52630 851 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 FILIP1LQ4L180 1135 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 RAD9BQ6WBX8 426 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 NELFCDQ8IXH7 590 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ZNF710Q8N1W2 664 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 ZNF713Q8N859 430 aaPredicted RBP11.33□□□□□ -0.6
RPE-206ENST00000429921 GMCL1P1Q8NEA9 526 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 RAD54LQ92698 747 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 GMCL1Q96IK5 515 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 FEZ1Q99689 392 aa11.33□□□□□ -0.6
RPE-206ENST00000429921 PYM1Q9BRP8 204 aaKnown RBP11.33□□□□□ -0.6
RPE-206ENST00000429921 PPP4R3AQ6IN85 833 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 REXO1L1PQ8IX06 675 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 PRIMPOLQ96LW4 560 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
RPE-206ENST00000429921 C7orf25Q9BPX7 421 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 LZTFL1Q9NQ48 299 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 PCNTO95613 3336 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 DDX39AO00148 427 aaKnown RBP11.32□□□□□ -0.6
RPE-206ENST00000429921 PSMA7O14818 248 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 CAP2P40123 477 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
RPE-206ENST00000429921 PABPC4Q13310 644 aaKnown RBP eCLIP11.32□□□□□ -0.6
RPE-206ENST00000429921 TTI2Q6NXR4 508 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 CCDC155Q8N6L0 562 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 HERC5Q9UII4 1024 aaKnown RBP11.32□□□□□ -0.6
RPE-206ENST00000429921 PPP2R2CQ9Y2T4 447 aa11.32□□□□□ -0.6
RPE-206ENST00000429921 SFI1A8K8P3 1242 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 MYO1BO43795 1136 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 NBPF12Q5TAG4 269 aaPredicted RBP11.31□□□□□ -0.6
RPE-206ENST00000429921 ACRBPQ8NEB7 543 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 P2RX5Q93086 422 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 PCMTD1Q96MG8 357 aaPredicted RBP11.31□□□□□ -0.6
RPE-206ENST00000429921 MRPL44Q9H9J2 332 aaKnown RBP11.31□□□□□ -0.6
RPE-206ENST00000429921 LIMA1Q9UHB6 759 aaKnown RBP11.31□□□□□ -0.6
RPE-206ENST00000429921 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 MSH4O15457 936 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 PBX1P40424 430 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 STIM1Q13586 685 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 KCNB1Q14721 858 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 PIGOQ8TEQ8 1089 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 CHP1Q99653 195 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 IKZF4Q9H2S9 585 aa11.31□□□□□ -0.6
RPE-206ENST00000429921 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
RPE-206ENST00000429921 EML1O00423 815 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
RPE-206ENST00000429921 POLD1P28340 1107 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
RPE-206ENST00000429921 CTTNQ14247 550 aaKnown RBP11.3□□□□□ -0.6
RPE-206ENST00000429921 GPBP1Q86WP2 473 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 CATSPER3Q86XQ3 398 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 ZKSCAN4Q969J2 545 aaPredicted RBP11.3□□□□□ -0.6
RPE-206ENST00000429921 LENG9Q96B70 501 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 CNOT6LQ96LI5 555 aaKnown RBP11.3□□□□□ -0.6
RPE-206ENST00000429921 GOPCQ9HD26 462 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 ZNF215Q9UL58 517 aaPredicted RBP11.3□□□□□ -0.6
RPE-206ENST00000429921 H7C1D1 291 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 NRDCO43847 1150 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 PLA2G4BP0C869 781 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 AMPD3Q01432 767 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 PDIA5Q14554 519 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 TMEM119Q4V9L6 283 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 WDR24Q96S15 920 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 SH2D3AQ9BRG2 576 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 TUBGCP2Q9BSJ2 902 aa11.3□□□□□ -0.6
RPE-206ENST00000429921 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms