RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 SNAP25P60880 206 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 CACNB2Q08289 660 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 ORC2Q13416 577 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 SLC39A14Q15043 492 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 STK38Q15208 465 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 USH1GQ495M9 461 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 PIK3AP1Q6ZUJ8 805 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 HS6ST3Q8IZP7 471 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 CPXCR1Q8N123 301 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP28Q96RU2 1077 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 ANP32EQ9BTT0 268 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 EHMT1Q9H9B1 1298 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 LMBRD1Q9NUN5 540 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 RABGAP1Q9Y3P9 1069 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 MORC2Q9Y6X9 1032 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 ZNF536O15090 1300 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 SPDYE3A6NKU9 549 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 LAD1O00515 517 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 MEIS2O14770 477 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 FIBPO43427 364 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 ALAS1P13196 640 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 COPB2P35606 906 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 STAT3P40763 770 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 TOB1P50616 345 aaPredicted RBP9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 UBE2HP62256 183 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 TTC38Q5R3I4 469 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 MAP3K21Q5TCX8 1036 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 GPR142Q7Z601 462 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 CCAR1Q8IX12 1150 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 DEFB123Q8N688 67 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 ANKLE1Q8NAG6 615 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 LINC00301Q8NCQ3 95 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 CHST13Q8NET6 341 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 LEO1Q8WVC0 666 aaPredicted RBP9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 ATG4CQ96DT6 458 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 AGBL1Q96MI9 1066 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 TEX13BQ9BXU2 312 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 RAVER2Q9HCJ3 691 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 OGDHLQ9ULD0 1010 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 PARP14Q460N5 1801 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 LOC285556D6RIA3 1793 aa9.39□□□□□ -0.91
SMARCAL1-206ENST00000427645 A0A1W2PPC1 479 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 SPDYE16A6NNV3 312 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 SPTLC2O15270 562 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 CNMDO75829 334 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 SLC25A27O95847 323 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 MBD3O95983 291 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 CFBP00751 764 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 ERVK-24P63145 666 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 GHRHRQ02643 423 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 CEBPZQ03701 1054 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 TMEM132BQ14DG7 1078 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 LRRC26Q2I0M4 334 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 WDR78Q5VTH9 848 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 JAKMIP3Q5VZ66 844 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 LHX8Q68G74 356 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 ADALQ6DHV7 355 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 SNRNP48Q6IEG0 339 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 NEK8Q86SG6 692 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 REPS2Q8NFH8 660 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 TBCKQ8TEA7 893 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 USP6NLQ92738 828 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 FLRT1Q9NZU1 646 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 FBXO40Q9UH90 709 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 ZNF214Q9UL59 606 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 CLIC4Q9Y696 253 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 RLFQ13129 1914 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 DOCK3Q8IZD9 2030 aa9.38□□□□□ -0.91
SMARCAL1-206ENST00000427645 XRCC5P13010 732 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 GCFC2P16383 781 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 ATP2B1P20020 1258 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 MAPK4P31152 587 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 BMP8BP34820 402 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 ME1P48163 572 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 HSD17B4P51659 736 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 PLS1Q14651 629 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 INF2Q27J81 1249 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 EARS2Q5JPH6 523 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 MORN1Q5T089 497 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 ARL6IP4Q66PJ3 421 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 PPP4R3AQ6IN85 833 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 USP17L6PQ6QN14 398 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 MOXD1Q6UVY6 613 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 PLEKHH3Q7Z736 793 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 RIOX2Q8IUF8 465 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 TDHQ8IZJ6 230 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 RASGRP4Q8TDF6 673 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 SOCS4Q8WXH5 440 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 FERMT2Q96AC1 680 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 UBE2OQ9C0C9 1292 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 ACAD9Q9H845 621 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 GDPD2Q9HCC8 539 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 TMEM260Q9NX78 707 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 PCDHB6Q9Y5E3 794 aa9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 DDX49Q9Y6V7 483 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-206ENST00000427645 ALPK3Q96L96 1907 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms